Gene YpAngola_A0421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0421 
Symbol 
ID5798885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp436715 
End bp437911 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content49% 
IMG OID641338428 
Productribosomal RNA large subunit methyltransferase N 
Protein accessionYP_001605027 
Protein GI162419386 
COG category[R] General function prediction only 
COG ID[COG0820] Predicted Fe-S-cluster redox enzyme 
TIGRFAM ID[TIGR00048] radical SAM enzyme, Cfr family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.662236 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.00298691 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTGAAC AATTATTAAC TGCATCAACG CCAATTGATG CCGCACCTCT GTCTGACAAT 
ACCGTTCAGA CCACCGCACC TGCTACCAGC AAAATCAATC TGCTCGATTT AAATCGTCAG
CAAATGCGCG AGTTTTTTGC CGAAATGGGA GAAAAACCTT TCCGGGCAGA TCAGGTCATG
AAGTGGATGT ATCACTATTG CTACGACGAT TTTGAGCAAA TGACCGACAT TAATAAAGGG
CTGCGGGCGA AATTGCAGCG CGTGGCAGAG ATCCGTGCGC CGGAAGTTGC AGAAGAGCAA
CGCTCTGTCG ATGGCACCAT TAAATGGGCA ATTAAAGTCG GCGATCAACA AGTTGAAACG
GTATATATCC CTGAAGCAGA CCGCGCAACG CTGTGTGTGT CATCCCAAGT CGGTTGTGCA
TTGGAGTGTA AATTCTGTTC GACCGCACAG CAGGGCTTTA ACCGTAATCT TCGCGTATCT
GAAATTATCG GTCAGGTATG GCGTGCGGCA AAAATTATTG GTTCATTGAA ATCAACCGGT
ACCCGGCCCA TTACCAACGT GGTCATGATG GGGATGGGGG AACCACTACT GAATCTGAAT
AATGTGGTGC CAGCGATGGA TATCATGATG GACGACTTCG GTTTTGGTTT ATCCAAACGC
CGTGTGACGC TGTCCACCTC TGGGGTGGTT CCGGCGTTGG ATAAACTGGG CGATATGATT
GACGTTGCGT TGGCTATCTC GTTACATGCG CCTACCGATG ATATTCGCGA TGAAATCGTC
CCTATCAACC GTAAATATAA TATTGAAACG TTCCTGGCTG CAGTGCGCCG TTATTTGGAT
AAATCCAAAG CCAACGGCGG GCGGGTTACC GTTGAGTACG TTATGCTGGA TCATATCAAT
GACAGCACTG AGCAAGCCCA TCAGTTAGCT GAGTGTTTGA AAGATACGCC CTGCAAGATC
AATTTGATCC CATGGAACCC GTTCCCTGGT GCACCTTATG GCCGTAGCTC AAACAGCCGG
GTAGATCGCT TTTCTAAGGT GTTGATGGAA TACGGCTTTA CCACTATCGT GCGTAAGACC
CGTGGCGATG ACATTGATGC CGCATGTGGC CAATTGGCCG GTGAGGTTAT CGACCGTACT
AAACGCACCT TGAAAAAGAA AATGGCGGGT GAACCTATTG CGATTAAGAC AGTCTGA
 
Protein sequence
MSEQLLTAST PIDAAPLSDN TVQTTAPATS KINLLDLNRQ QMREFFAEMG EKPFRADQVM 
KWMYHYCYDD FEQMTDINKG LRAKLQRVAE IRAPEVAEEQ RSVDGTIKWA IKVGDQQVET
VYIPEADRAT LCVSSQVGCA LECKFCSTAQ QGFNRNLRVS EIIGQVWRAA KIIGSLKSTG
TRPITNVVMM GMGEPLLNLN NVVPAMDIMM DDFGFGLSKR RVTLSTSGVV PALDKLGDMI
DVALAISLHA PTDDIRDEIV PINRKYNIET FLAAVRRYLD KSKANGGRVT VEYVMLDHIN
DSTEQAHQLA ECLKDTPCKI NLIPWNPFPG APYGRSSNSR VDRFSKVLME YGFTTIVRKT
RGDDIDAACG QLAGEVIDRT KRTLKKKMAG EPIAIKTV