| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A0370 |
|---|
| Symbol | |
|---|
| ID | 5798834 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 383488 |
|---|
| End bp | 384183 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641338378 |
|---|
| Product | aspartate racemase family protein |
|---|
| Protein accession | YP_001604978 |
|---|
| Protein GI | 162419967 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1794] Aspartate racemase |
|---|
| TIGRFAM ID | [TIGR00035] aspartate racemase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00000827408 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAA TTTTAGGTCT TATTGGTGGC ATGAGTTGGG AATCAACCAT TCCCTATTAC
AGAATGATTA ACCAGCACGT TAAAGCACAA TTAGGCGGCT TACACAGCGC TAAAATTATT
CTCTACAGTG TGGACTTTCA TGAGATTGAA CAGCTTCAGG CAAAAGGTGA CTGGCAAACA
GCCGCTCAAT TACTCTCTAA TGCCGCTATC TCATTAAAAC ATGCTGGCGC GGAGGTTATC
GTGGTGTGCA CCAATACCAT GCACAAAGTG GCCGATGATA TTGAAGCAGC CTGCGGGTTG
CCCTTACTGC ACATTGCTGA TGCCACTGCC GTCCAAATTA AACAACAAGG AATAGATAAG
ATCGGTCTAT TAGGGACCCG CTATACCATG GAGCAAGGCT TTTACCGTGG CCGTTTAACA
GAAAAACACG GCATTGAGGT TATCACTCCA GACGATACAG ACCGAGAGGC AGTTAACCGC
ATTATTTATG AAGAGCTCTG CTTGGGGATC ATCAGTGAAA CCTCCCGGGA TGCCTATCGC
CGGGTGATAA AGAAACTCGA AGCACAGGGT GTGCAAGGGA TTATTTTTGG GTGTACCGAA
ATCACGCTAC TGGTTAACGC GCAAGATGCC TCAGTACCGG TGTTTGATAC CACAGCGATA
CATGCCAGCG CCGCGGCTGA TTACGCACTG CAATAA
|
|---|
| Protein sequence | MMKILGLIGG MSWESTIPYY RMINQHVKAQ LGGLHSAKII LYSVDFHEIE QLQAKGDWQT
AAQLLSNAAI SLKHAGAEVI VVCTNTMHKV ADDIEAACGL PLLHIADATA VQIKQQGIDK
IGLLGTRYTM EQGFYRGRLT EKHGIEVITP DDTDREAVNR IIYEELCLGI ISETSRDAYR
RVIKKLEAQG VQGIIFGCTE ITLLVNAQDA SVPVFDTTAI HASAAADYAL Q
|
|---|
| |