Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0361 |
Symbol | truA |
ID | 5798825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 374662 |
End bp | 375543 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641338369 |
Product | tRNA pseudouridine synthase A |
Protein accession | YP_001604969 |
Protein GI | 162419146 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0101] Pseudouridylate synthase |
TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGGGT TTGAATTAGA TCAGGAAGAA ACATTAGTTC AGCAAAACAC ATTGGCTCAG CAAGAAAAAC CGGCAGAAGT GGCCGGTTTG AAAATTGCGT TGGGTATTGA GTATAACGGT AGCCGCTATT TTGGTTGGCA ACGGCAGCAA GAGGTTGCCA GCGTGCAGGC CTGTCTTGAG GCGGCATTAT CCAAAGTGGC TAATGAACCC ATTGGGGTCT TCTGCGCTGG CCGTACCGAT GCAGGGGTCC ATGCTACCGG GCAAGTTGTG CACTTTGTTA CCTCTGCAGT ACGTAAAGAC GCCGCCTGGA CTATGGGGGT CAACAGCCAT TTGCCCGCGG ATATCGCAGT GCGTTGGGTC AAAACCGTCG ATAACGATTT TCATGCCCGC TTTAGCGCAA CGGCCCGCCG CTATCGCTAT ATCATTTTTA GCCACCGCTA TCGCCCTGCG ATATTGGCGC AAGGGGTCAC CCATTGCTAT ATGCCATTGG ATGCAGAAAA AATGGAACGC GCCGCGCAAT GTTTACTCGG CGAAAATGAT TTTACCTCTT TCCGTGCCGT ACAATGTCAA TCCCGCACGC CATGGAGAAA TGTAAAACAT GTCAAAGTTA CCCGACATGG CGCGTATATC GTGGTAGATA TCAAGGCCAA CGCGTTTGTA CATCATATGG TGCGCAATAT CGTTGGGAGC CTGATAGAAA TTGGTTGTGG CAATCAGGAC GTGACCTGGA TGGCAGAATT GTTGGCGTTG AAGGACAGAA CACGTGCTGC CGCAACCGCC AAAGCCGATG GGTTGTATTT AGTGTCTGTC GATTACCCGG ACCACTTCGC GTTACCCAAA GTTCCTATGG GGCCTTTGTT TTTGGCGGAT GACGAGGGTT AA
|
Protein sequence | MSGFELDQEE TLVQQNTLAQ QEKPAEVAGL KIALGIEYNG SRYFGWQRQQ EVASVQACLE AALSKVANEP IGVFCAGRTD AGVHATGQVV HFVTSAVRKD AAWTMGVNSH LPADIAVRWV KTVDNDFHAR FSATARRYRY IIFSHRYRPA ILAQGVTHCY MPLDAEKMER AAQCLLGEND FTSFRAVQCQ SRTPWRNVKH VKVTRHGAYI VVDIKANAFV HHMVRNIVGS LIEIGCGNQD VTWMAELLAL KDRTRAAATA KADGLYLVSV DYPDHFALPK VPMGPLFLAD DEG
|
| |