Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0178 |
Symbol | |
ID | 5798642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 190049 |
End bp | 190312 |
Gene Length | 264 bp |
Protein Length | 87 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641338199 |
Product | IS1, transposase orfA |
Protein accession | YP_001604805 |
Protein GI | 162419987 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3677] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00316211 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.000000137018 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTTGCA TTAACGTTCA TTGTCCCCGT TGTGATTCTG CTTTGGTTTA TCGACATGGT CAGAACCCTA AGGGCCAAAG CCGTTTCCGC TGCCGTGAGT GCCGCTCTGT ATTCCAACTG ACCTACACTT ATCAGGCCAG AAAGCCCGAA GTTAAAGGGC AGATCGTTGA TATAGCCTTT AGCGGCACAG GTGTGTGGGA TACGGCAAGA ACGCTAAAAA TCGGTATCAA TACCGTTATC CGCACTTTAA AAAACTCTTG CTGA
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Protein sequence | MACINVHCPR CDSALVYRHG QNPKGQSRFR CRECRSVFQL TYTYQARKPE VKGQIVDIAF SGTGVWDTAR TLKIGINTVI RTLKNSC
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