Gene YpAngola_A0178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0178 
Symbol 
ID5798642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp190049 
End bp190312 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content48% 
IMG OID641338199 
ProductIS1, transposase orfA 
Protein accessionYP_001604805 
Protein GI162419987 
COG category[L] Replication, recombination and repair 
COG ID[COG3677] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00316211 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.000000137018 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTTGCA TTAACGTTCA TTGTCCCCGT TGTGATTCTG CTTTGGTTTA TCGACATGGT 
CAGAACCCTA AGGGCCAAAG CCGTTTCCGC TGCCGTGAGT GCCGCTCTGT ATTCCAACTG
ACCTACACTT ATCAGGCCAG AAAGCCCGAA GTTAAAGGGC AGATCGTTGA TATAGCCTTT
AGCGGCACAG GTGTGTGGGA TACGGCAAGA ACGCTAAAAA TCGGTATCAA TACCGTTATC
CGCACTTTAA AAAACTCTTG CTGA
 
Protein sequence
MACINVHCPR CDSALVYRHG QNPKGQSRFR CRECRSVFQL TYTYQARKPE VKGQIVDIAF 
SGTGVWDTAR TLKIGINTVI RTLKNSC