| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A0170 |
|---|
| Symbol | |
|---|
| ID | 5798634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 178674 |
|---|
| End bp | 181322 |
|---|
| Gene Length | 2649 bp |
|---|
| Protein Length | 882 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641338192 |
|---|
| Product | AAA family ATPase |
|---|
| Protein accession | YP_001604798 |
|---|
| Protein GI | 162419253 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0000964396 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACAACGC ATTCAGCACA CTTATTACGC CGCTTAAATC CCTATTGCGC ACAGGCACTG
GCCGGTGCTG CCACCCTGTG TCAGACCCGC GCCCATGCCG AGATCACTGT CGAACACTGG
TTGTTAAAAC TGCTGGAGCA GGGCGAAGGC GATATCACGG TGATTGCCCG GCGTTATGAG
TGGGACATGG ACAGCTTGTG GCAAGGGTTA CTGGCCTATC TGGATACTTT GCCGCGCACG
GTACAGGGTA AACCCCAACT GTCCGCCGCG TTGCAGCAAC TGATCAAAAG TGCCTGGCTG
GATGCCTCGT TGCAGGAAAA TGCTGATGCG GTGCGCTCGG TTCATCTAAT GGCAGCGCTG
ATAAATTCGC CATCATTATT GGCCGCCGAT GCCGCCTGGC CGTTGCTCAG CCTGAGCACT
ACCCAACTAC ACCGCTTGTT GCCGTTGCTG GACAGCCAAT CCGACGAACG CCCTGAAATA
CAGCAGGCCG CAGCACTGGC AGACAGCCCG GTCAATCTGA CCGATGAGGC CGCGACGGTT
ACCTCCGCCA GTGGTCAGCC GCAACTGAAT GACGCGCTGC AAGCGGCGCT GGATAAATTT
ACCCTCGATG TCACCGCCAA AGCCCGTGCC AACCAGATTG ATCCGATTTT TGGCCGCGAC
AGCGAAATCC GCCAGATGAT CGACATCCTG TCGCGCCGCC GTAAAAACAA CCCGATTTTG
GTGGGTGAAC CGGGTGTGGG GAAAACCGCC TTGGTTGAAG GGCTGGCACT GCGCATTGCC
GAGGGCAACG TACCGGACAG CCTGAAAACC GTCAGTGTGC GCACACTGGA TTTGGGTCTG
TTACAGGCCG GTGCCGGGGT CAAAGGCGAG TTCGAACAGC GCCTGAAAAA TGTTATCGAG
GCGGTGCAAC AATCCCCCAG CCCGGTGCTG CTGTTTATCG ACGAAGCCCA CACCATTATC
GGGGCCGGTA ATCAGGCCGG TGGTGCCGAT GCGGCCAACC TGCTGAAACC GGCACTGGCG
CGTGGCGAAC TGCGCACCAT CGCCGCCACC ACCTGGTCCG AATACAAACA GTATTTTGAA
CGCGATGCCG CACTGGAGCG CCGCTTCCAG ATGGTCAAAG TGGACGAGCC GGATGATGAC
ACCGCCTGCC TGATGCTGCG TGGCCTGAAA GAACGTTACG CCACCCATCA CGGCGTGCAT
ATTCTGGACG CCGCTATCAC CGCAGCGGTT ACCCTGTCGC GCCGCTTCCT GACCGGCCGC
CAACTGCCGG ACAAAGCGGT GGATCTGCTC GATACCGCCG GTGCCCGGGT GCGCATGAGC
ATTGACACCT TGCCGACTGC GCTGATGGCG ATTAACGCCG AGCTGGCCGC ACTGGCGATG
GAGCAACAGG CCATCGAACA GGACCTGCTC CTGCTGCCGA ATGTCAGTTC AACGCGCTTA
CCTGAGATTG AGCAACGCCG CGCCGCGCTG GCGGTTGGGC AGCACACACT CGAACAGCAA
TATAAAGAAG AAAAACGGCT GACCACCCTG ATTATCGAGG CGCGTCAGGA TATCGCCAAC
GTGGCACATC TGGTCGCGTT GCAGGAGGAA CTCGTTCAGA TCCAAGGCAA CGCGCCGCTG
CTGTCGCTGG ACGTTGATGT GTGCACTGTT GCGGCTGTGA TCGCCGACTG GACCGGCGTG
CCGCTGAGCA GTCTGTTGAA AGACGAACAG ACCGATTTGT TGCAACTGGA AAACCATCTC
GCCACCCGCG TAGTCGGGCA GGATACGGCG CTGGGTGCGC TGGCGCAACG GCTGCGGGCG
GCGAAAACCG GGCTGACATC AGAGAATGGC CCGCTGGGGG TGTTCCTGCT GGTCGGGCCG
AGTGGGATCG GCAAAACCGA AACCGCGCTG GCACTGGCCG ACAGCCTGTT CGGCGGCGAG
AAATCGCTGA TCACCATCAA CTTATCGGAG TATCAGGAAG CTCACACCGT CTCCCAGTTG
AAAGGGTCGC CCCCAGGTTA TGTTGGCTAC GGTCAGGGTG GTGTATTAAC CGAAGCGGTA
CGTAAACGGC CTTACAGCGT GGTGCTGCTG GATGAAGTGG AAAAAGCCCA TCGTGATGTG
CTGAACCTGT TCTATCAGGT GTTTGACCGG GGGTTCATGC GCGACGGTGA AGGGCGCGAA
ATTGATTTTC GTAACACAGT GATCCTAATG ACGGCCAATT TAGGCAGTGA TCATCTGATG
CAGTTACTGG ATGAACAACC GGAAGCGACG CACAGTGATT TACACGAGCT GCTGCGCCCG
ATCCTGCGCG ATCATTTCCA GCCCGCGCTA TTAGCCCGCT TCCAGACCTT GATCTACCGC
CCACTGAATG CCATCGCATT GCGCACCATC GTCGAGATGA AACTGGCACA GGTCGCTAAA
CGCCTGAACA AACATTACGG CCTGCACTGC ACCATTGAGG AAAGCCTCTA CGACACACTG
GTCGCCGCCT GCCTGCTGCC GGACACCGGC GCACGCAACA TCGACAGCCT GCTCAATCAA
CAAATCTTAC CGGTATTGAG CCAGCAGCTG TTAAGCCGCA TGAGCGAGCA ACAGCGCACC
ACCTCGCTGA CGCTGGGCTG GGATGAAGCC GACGGCATTA CCCTTGAATT TGAAGGAGGC
GAAAAATGA
|
|---|
| Protein sequence | MTTHSAHLLR RLNPYCAQAL AGAATLCQTR AHAEITVEHW LLKLLEQGEG DITVIARRYE
WDMDSLWQGL LAYLDTLPRT VQGKPQLSAA LQQLIKSAWL DASLQENADA VRSVHLMAAL
INSPSLLAAD AAWPLLSLST TQLHRLLPLL DSQSDERPEI QQAAALADSP VNLTDEAATV
TSASGQPQLN DALQAALDKF TLDVTAKARA NQIDPIFGRD SEIRQMIDIL SRRRKNNPIL
VGEPGVGKTA LVEGLALRIA EGNVPDSLKT VSVRTLDLGL LQAGAGVKGE FEQRLKNVIE
AVQQSPSPVL LFIDEAHTII GAGNQAGGAD AANLLKPALA RGELRTIAAT TWSEYKQYFE
RDAALERRFQ MVKVDEPDDD TACLMLRGLK ERYATHHGVH ILDAAITAAV TLSRRFLTGR
QLPDKAVDLL DTAGARVRMS IDTLPTALMA INAELAALAM EQQAIEQDLL LLPNVSSTRL
PEIEQRRAAL AVGQHTLEQQ YKEEKRLTTL IIEARQDIAN VAHLVALQEE LVQIQGNAPL
LSLDVDVCTV AAVIADWTGV PLSSLLKDEQ TDLLQLENHL ATRVVGQDTA LGALAQRLRA
AKTGLTSENG PLGVFLLVGP SGIGKTETAL ALADSLFGGE KSLITINLSE YQEAHTVSQL
KGSPPGYVGY GQGGVLTEAV RKRPYSVVLL DEVEKAHRDV LNLFYQVFDR GFMRDGEGRE
IDFRNTVILM TANLGSDHLM QLLDEQPEAT HSDLHELLRP ILRDHFQPAL LARFQTLIYR
PLNAIALRTI VEMKLAQVAK RLNKHYGLHC TIEESLYDTL VAACLLPDTG ARNIDSLLNQ
QILPVLSQQL LSRMSEQQRT TSLTLGWDEA DGITLEFEGG EK
|
|---|
| |