Gene YpAngola_A0140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0140 
Symbol 
ID5798604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp139988 
End bp140542 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content46% 
IMG OID641338163 
ProductYggT family membrane protein 
Protein accessionYP_001604770 
Protein GI162418587 
COG category[S] Function unknown 
COG ID[COG0762] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.00236591 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTAACGC TGACTTTTCT GGCAAAAACG GTCATTGACC TATATGTGAT GGTGCTGTTG 
TTGCGCATCT GGATGCAGTG GGTTCACAGT GATTTCTATA ACCCATTGTC TCAATTTGTG
GTGAAAATAA CCCAACCTAT TGTTGGCCCA CTGCGCCGAG TGGTTCCCTC TATGGGGCCA
ATCGATAGCG CATCATTGCT GTTGGCATTT TTACTGATGA CCATTAAATA CCCGCTGCTA
TTACTGATTG ATAGCGGATC CTTATCACTC AGTATTTATA ACCTCTTGTT CGGCCTTATT
GCGCTGGTAA AAGCGGTGGG TTACCTGATT TTCTGGGTCA TGATTATCCG TGCGCTGATG
AGTTGGATCA GTCAGGGTCG TAGCCCGGTA GACTACCTGC TGCTGCAGTT AACTGAACCA
TTAATGGCAC CGATTCGCCG TATTTTGCCT GCGATGGGGG GTATCGATTT CTCAGCAATG
GTTGTCATCC TTATCTTGTA TCTGCTCAAC TTTTTAGGCA TGGATCTATT TGGAGCGATG
TGGGTCATGC TGTGA
 
Protein sequence
MLTLTFLAKT VIDLYVMVLL LRIWMQWVHS DFYNPLSQFV VKITQPIVGP LRRVVPSMGP 
IDSASLLLAF LLMTIKYPLL LLIDSGSLSL SIYNLLFGLI ALVKAVGYLI FWVMIIRALM
SWISQGRSPV DYLLLQLTEP LMAPIRRILP AMGGIDFSAM VVILILYLLN FLGMDLFGAM
WVML