| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A0111 |
|---|
| Symbol | menA |
|---|
| ID | 5798576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 113417 |
|---|
| End bp | 114334 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641338135 |
|---|
| Product | 1,4-dihydroxy-2-naphthoate octaprenyltransferase |
|---|
| Protein accession | YP_001604747 |
|---|
| Protein GI | 162419020 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase |
|---|
| TIGRFAM ID | [TIGR00751] 1,4-dihydroxy-2-naphthoate octaprenyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTAT CAATCAACAC CAGCCAAACC CAGGCTTGGC TGGAAAGCCT ACGACCACGC
ACCCTACCAT TGGCGTTCGC CTCTATCGTT ACCGGTTCAG CTCTGGCTGT CTGGCTCGAT
AGTTTTAAAC CCGCCGTGGC ACTATTAGCC CTATTAACTG CCGGTCTACT GCAAATTCTA
TCCAATCTGG CTAACGACTA TGGCGATGCG GTGAAAGGCA GCGATACCGA AGAACGTATC
GGGCCATTAC GCGGTATGCA AAAAGGGATA ATTAGCCACC AGCAAATGAA AGTGGCGCTA
ATTATCACCG TGATCTTAAC AATCATTTCA GGTATCGCCC TCATTGCCGT CGCCTGTGAA
AAGCCCAGCG ATATTCTTGG ATTTTTACTG CTTGGCCTGA TGGCGATTGT TGCCGCCATT
ACTTACACCG TGGGGAGAAA ACCCTATGGT TATATGGGAT TGGGTGATAT TTCGGTATTG
GTATTCTTCG GTTGGTTAAG CGTCGCAGGG ACCTATTATC TTCAAGCTGG CCACTTTGAT
AGCATCGTCA TGCTGCCGGC CACGGCCTGT GGTTTACTGG CCACGGCGGT ATTAAATATT
AATAACTTAC GCGATATCGA AAATGATAAA GCAAATGGCA AAAATACGCT GGCAGTCCGT
CTAGGGCCTG TCGTAGCACG CTATTATCAT GCGCTGTTAA TTGGTGCCGC CATCTTCTGC
CTGGCACTCT TCAGCATTCT CCATCTGCAC AGTTGGCACG GTTGGATCTT TTTATTAGCG
ATCCCATTAC TGGGAAAACA TGCGCTGTTT GTTTTACGGG ACCCTACCGC AGCAGGTATG
CGCCCTATGC TCGAGCAGAT GGTGAAAGCC GCTTTACTGA CCAATATCCT GTTTGCTGTG
GGCCTGGTAT TCAGTTAA
|
|---|
| Protein sequence | MSLSINTSQT QAWLESLRPR TLPLAFASIV TGSALAVWLD SFKPAVALLA LLTAGLLQIL
SNLANDYGDA VKGSDTEERI GPLRGMQKGI ISHQQMKVAL IITVILTIIS GIALIAVACE
KPSDILGFLL LGLMAIVAAI TYTVGRKPYG YMGLGDISVL VFFGWLSVAG TYYLQAGHFD
SIVMLPATAC GLLATAVLNI NNLRDIENDK ANGKNTLAVR LGPVVARYYH ALLIGAAIFC
LALFSILHLH SWHGWIFLLA IPLLGKHALF VLRDPTAAGM RPMLEQMVKA ALLTNILFAV
GLVFS
|
|---|
| |