Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0072 |
Symbol | secB |
ID | 5798537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 78186 |
End bp | 78662 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641338099 |
Product | preprotein translocase subunit SecB |
Protein accession | YP_001604711 |
Protein GI | 162419011 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1952] Preprotein translocase subunit SecB |
TIGRFAM ID | [TIGR00809] protein-export chaperone SecB |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGAAC AAAACAACAC CGAGATGGCT TTCCAGATCC AACGTATCTA CACCAAAGAT ATCTCCTTCG AAGCCCCTAA TGCTCCGCAG GTTTTTCAGC AGGATTGGCA GCCAGAAGTT AAACTTGATC TAGATACGGC TTCTAGCCAA CTGGCGGAAG ATGTGTATGA AGTGGTACTG CGTGTGACTG TAACGGCCTC TTTGGGTGAA GAAACCGCGT TCCTGTGTGA AGTTCAACAA GGTGGCATCT TCTCCGTTGC GGGTATCGAA GGCACTCAAC TGGCGCATTG TTTAGGCGCA TATTGTCCGA ATATTCTGTT CCCGTATGCG CGCGAATGTA TCACCAGCCT GGTCTCTCGC GGTACTTTCC CACAGCTGAA TTTGGCACCT GTTAACTTTG ATGCTCTGTT CATGAATTAT CTGCAACAGC AGGCTGAAGG TGAAGTTGAA GGTGTTGAAC AACGTCAGGA TGCCTGA
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Protein sequence | MSEQNNTEMA FQIQRIYTKD ISFEAPNAPQ VFQQDWQPEV KLDLDTASSQ LAEDVYEVVL RVTVTASLGE ETAFLCEVQQ GGIFSVAGIE GTQLAHCLGA YCPNILFPYA RECITSLVSR GTFPQLNLAP VNFDALFMNY LQQQAEGEVE GVEQRQDA
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