Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0062 |
Symbol | rfaC |
ID | 5798527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 67393 |
End bp | 68358 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641338090 |
Product | ADP-heptose:LPS heptosyl transferase I |
Protein accession | YP_001604702 |
Protein GI | 162420814 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | [TIGR02193] lipopolysaccharide heptosyltransferase I |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0223597 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGTAT TAATCGTTAA AACCTCGTCA ATGGGCGATG TTTTACATAC CTTACCCGCG CTGACGGATG CCATGAATGC CATACCCGGT ATTCGCTTCG ATTGGGTGGT AGAAGAAGGG TTCAGCCAAA TCCCCAGTTG GCATCCGGCG GTGGATAAAG TGATCCCGGT GGCCATCCGC CGTTGGCGTA AAAACTGGTT TGGTAGTGAT ACCCGGCAGG AACGCTGTGA TTTTAAGCGT GTGGTACAAC AACGCAGTTA TGATCGGGTC ATTGATGCCC AAGGGTTGAT TAAAAGCGCC GCGCTGATAA CCCGGATTGC GAAAGGCACG AAGCACGGGC CGGATTGTAA AAGTGCCCGT GAGCCGTTTG CCAGTTGGTT TTATAACTGC CGCCATGAAA TTGATACCAA ACAACATGCC GTAGAACGTA TACGTCAACT GTTTGCTAAA AGCCTCGGCT ATGATAAACC GGAAAGTTAT GGCGACTATG CCATCGCACA ACGCTTTTTA AATCAGTTAC CGGCCGATGC AGGTCAGTAC TTGGTTTTCC TACATGCGAC GACCCGTGAC AACAAGCACT GGCCCGAGAG CCATTGGGTA CAATTGATTG AGTTAGTGCA ACCCACAGGT TTAAAAATCA AACTACCGTG GGGCGCAGAA CATGAGCATC AGCGCGCTTT ACGATTAGCG GAACATTTCC CACACGTAGA GGTTCTGCCT AAGCTCAGTC TTCAGCAGGT CGCCGAGGTT CTGGCGGGTG CAAAAGCCGT AGTCTCTGTC GATACTGGCC TCAGCCATCT GACCGCCGCC CTGGATCGCC CAAACATTAC GCTGTTTGGC CCCACTGACC CCGGTTTAAT CGGCGGCTAC GGGAAAAACC AAATTGCCGT GATTTCCGAG CAAAAAAAGA TGGATAGCCT CTCTGCGCCC ACTATTATGG CACGATTAGA AACACTCATT TCATAG
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Protein sequence | MHVLIVKTSS MGDVLHTLPA LTDAMNAIPG IRFDWVVEEG FSQIPSWHPA VDKVIPVAIR RWRKNWFGSD TRQERCDFKR VVQQRSYDRV IDAQGLIKSA ALITRIAKGT KHGPDCKSAR EPFASWFYNC RHEIDTKQHA VERIRQLFAK SLGYDKPESY GDYAIAQRFL NQLPADAGQY LVFLHATTRD NKHWPESHWV QLIELVQPTG LKIKLPWGAE HEHQRALRLA EHFPHVEVLP KLSLQQVAEV LAGAKAVVSV DTGLSHLTAA LDRPNITLFG PTDPGLIGGY GKNQIAVISE QKKMDSLSAP TIMARLETLI S
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