Gene YpAngola_A0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0028 
SymbolglnL 
ID5798493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp31179 
End bp32228 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content49% 
IMG OID641338057 
Productnitrogen regulation protein NR(II) 
Protein accessionYP_001604669 
Protein GI162418453 
COG category[T] Signal transduction mechanisms 
COG ID[COG3852] Signal transduction histidine kinase, nitrogen specific 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.533996 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACAG GCACGCTGCC CGATGCTGGG CAGATCCTCA ATACTCTCAT TAATAGCATT 
CTGCTGTTAG ATGATGATTT GGCTATTCAT TATGCCAACC CCGCAGCCCA GCAACTTCTG
GCGCAAAGCT CCCGTAAACT TTTTGGTACA CCTCTGCCTG ATTTATTAGG CTATTTTTCA
CTGAATATCG TGTTGATGCG AGAGAGTTTG CAAGCCGGGC AAGGGTTTAC TGATAACGAA
GTGACATTAG TTGTTGATGG CCGGGCACAT ATTTTATCGC TGACCGCACA GTCCCTAGCG
GAAGGGTTTA TTCTGCTAGA ATTAGCCCCG ATGGATAATC AGCGCCGGTT AAGCCAAGAG
CAATTGCAAC ACGCTCAACA AGTTGCCGCA CGTGATTTAG TGCGCGGATT GGCTCACGAG
ATTAAAAACC CACTCGGAGG CCTACGGGGC GCTGCGCAAT TATTAGCTAA AGCGTTACCC
GATCCAGCGT TGCTGGAATA TACCCAAGTG ATTATTGAAC AGGCGGATCG CCTACGTAAT
TTAGTTGATC GCTTGTTAGG CCCACAGCGG CCTGGCCAAC ATATTACACA GAGTATTCAT
CAGGTTGCTG AGCGGGTTTG CCAATTAGTC TCATTGGAAA AACCAGATAA CGTCACGTTA
ATCCGCGACT ATGATCCAAG CCTCCCTGAG CTTGCCCATG ATCCAGACCA AATAGAACAA
GTGCTGCTGA ATATCACCCG TAACGCATTA CAGGCTCTCG GGGAGACTGG CGGCACAATT
ACACTTCGCA CCCGAACCGC TTTCCAAGTG ACGCTACATG GCATGCGCTA CCGTTTAGCC
GCTCGGATTG ATATTGAAGA TGACGGTCCC GGTGTACCAA CGCAATTACA AGATACCGTA
TTCTATCCGA TGGTCAGTGG CCGCGAGGGC GGTACGGGTC TTGGTTTATC TATCGCCCGT
AATCTTATCG ATCAGCATTC GGGTAAAATT GAATTTAACA GTTGGCCAGG ACACACCGAG
TTTTCGGTTT ACCTGCCTAT TCGCCAGTGA
 
Protein sequence
MATGTLPDAG QILNTLINSI LLLDDDLAIH YANPAAQQLL AQSSRKLFGT PLPDLLGYFS 
LNIVLMRESL QAGQGFTDNE VTLVVDGRAH ILSLTAQSLA EGFILLELAP MDNQRRLSQE
QLQHAQQVAA RDLVRGLAHE IKNPLGGLRG AAQLLAKALP DPALLEYTQV IIEQADRLRN
LVDRLLGPQR PGQHITQSIH QVAERVCQLV SLEKPDNVTL IRDYDPSLPE LAHDPDQIEQ
VLLNITRNAL QALGETGGTI TLRTRTAFQV TLHGMRYRLA ARIDIEDDGP GVPTQLQDTV
FYPMVSGREG GTGLGLSIAR NLIDQHSGKI EFNSWPGHTE FSVYLPIRQ