| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A0024 |
|---|
| Symbol | engB |
|---|
| ID | 5798488 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 26188 |
|---|
| End bp | 26838 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641338052 |
|---|
| Product | ribosome biogenesis GTP-binding protein YsxC |
|---|
| Protein accession | YP_001604665 |
|---|
| Protein GI | 162420510 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0218] Predicted GTPase |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0000064968 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACCATCA GAAACTATAA CTATCATATG ACTCACTTCG TCATCAGTGC TCCGGATATT
CGTCACCTAC CACGGGATGA AGGTATTGAA GTCGCATTCG CGGGCCGCTC AAACGCGGGT
AAATCCAGTG CACTCAATAC ATTAACTAAC CAAAAAGGTT TAGCCAGAAC CAGTAAAACA
CCGGGGCGAA CTCAGCTAAT TAACCTGTTT GAAGTGGTTG ATGGTGTCCG TCTAGTGGAC
TTACCAGGTT ATGGCTATGC CGAAGTGCCT GAGGAGATGA AACTCAAGTG GCAACGTGCG
CTGGGTGAAT ATTTGCAGAA ACGTAATTGT CTGAAAGGAT TAGTTGTGCT GATGGATATT
CGTCATCCAT TGAAAGATTT GGATCAGCAG ATGATTACCT GGGCGGTCGC GGTCGGTACA
CCGGTTCTTT TGCTGTTGAC CAAAGCGGAT AAGCTGGCAT CCGGTGCGTG TAAAGCACAA
TTAAATCTGG TGCGAGAAGC TATCATCCCA TTTATGGGTG ATATTCAGGT CGAGGCATTC
TCATCACTGA AAAAGATTGG TGTCGATAAG TTACGGGAAA AACTGGACAC CTGGTTTAGT
GAGATCCCAC CAGAAGTTAT GGCTGAAGAG TTTGACGGCG AAGGCGAGTA A
|
|---|
| Protein sequence | MTIRNYNYHM THFVISAPDI RHLPRDEGIE VAFAGRSNAG KSSALNTLTN QKGLARTSKT
PGRTQLINLF EVVDGVRLVD LPGYGYAEVP EEMKLKWQRA LGEYLQKRNC LKGLVVLMDI
RHPLKDLDQQ MITWAVAVGT PVLLLLTKAD KLASGACKAQ LNLVREAIIP FMGDIQVEAF
SSLKKIGVDK LREKLDTWFS EIPPEVMAEE FDGEGE
|
|---|
| |