Gene YPK_4227 details

Gene Information

• Locus tag: YPK_4227
• Symbol: atpC
• ID: 6089560
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 4665527
• End bp: 4665949
• Gene Length: 423 bp
• Protein Length: 140 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 641599326
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_001722936
• Protein GI: 170026431
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGCAA TGACTTACCA TCTGGATGTT GTGAGCGCCG AGAAGAAAAT GTTTTCAGGC 
GTGGTACAAA AGATTCAGGT GACGGGTAGT GAAGGTGAAC TGGGTATTTT CCCTGGGCAC 
GCCCCACTGC TCACTGCCAT CAAGCCTGGC ATGATACGTA TCGTTAAACA GTTCGGTGAG 
GAAGAGTTTA TTTATCTTTC TGGCGGCATC CTTGAGGTGC AACCGAGCGT TGTGATCGTA 
TTGGCTGACA CAGCTATTCG TGGGCTGGAT CTGGACGAAG CAAGAGCGCT GGAATCTAAG 
CGTAAAGCAG AAGCCCATAT TAATAACTCC CACGGCGATG TCGACTATGC TCAGGCATCC 
GCTGAATTGG CGAAGGCGAT TGCGAAACTA CGCGTAATTG AGCTAACCAA GAAAGCGATG 
TAA 

 

Protein sequence

MAAMTYHLDV VSAEKKMFSG VVQKIQVTGS EGELGIFPGH APLLTAIKPG MIRIVKQFGE 
EEFIYLSGGI LEVQPSVVIV LADTAIRGLD LDEARALESK RKAEAHINNS HGDVDYAQAS 
AELAKAIAKL RVIELTKKAM