Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_4224 |
Symbol | |
ID | 6089006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 4661501 |
End bp | 4663042 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641599323 |
Product | F0F1 ATP synthase subunit alpha |
Protein accession | YP_001722933 |
Protein GI | 170026428 |
COG category | [C] Energy production and conversion |
COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00414343 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACTGA ATTCCACCGA AATCAGCGAA CTGATCAAGC AGCGCATTGC TCAGTTCAAT GTAGTGAGCG AAGCTCACAA TGAAGGTACT ATTGTTTCCG TTAGTGACGG GATCATTCGT GTACACGGTC TGGCCGATGT TATGCAGGGT GAGATGATCG CACTGCCAGG CAACCGTTAC GCAATCGCAC TGAACTTGGA GCGCGACTCC GTAGGTGCTG TAGTTATGGG TCCGTACGCC GATCTTGCCG AAGGCATGAA GGTTAAATGT ACTGGCCGTA TCCTGGAAGT TCCTGTCGGT CGTGGCCTGT TGGGGCGTGT CGTCAATACT CTGGGTGAAC CTATTGATGG TAAAGGTTCT ATAGAAAACG ACGGCTTCTC AGCTGTTGAA GCTATCGCAC CTGGTGTTAT CGAACGTCAA TCCGTTGATG AGCCTGTTCA GACGGGCTAT AAATCCGTCG ATGCCATGAT CCCAATTGGT CGTGGTCAGC GTGAATTGAT CATCGGTGAC CGTCAGACAG GTAAAACTGC ACTGGCGATT GATGCGATCA TCAACCAACG CGATTCCGGC ATTAAATGTG TGTATGTTGC TATCGGCCAG AAAGCCTCTA CTGTTGCAAA CGTAGTGCGC AAGCTGGAAG AACATGACGC ATTAGCTAAC ACCATTGTGG TTGTTGCTAC TGCATCAGAA TCTGCAGCAT TGCAGTATCT GGCACCTTAC TCCGGTTGTG CCATGGGTGA ATATTTCCGT GATCGCGGTG AGGATGCGCT GATTATTTAT GATGACCTGT CTAAACAGGC TGTTGCATAT CGTCAAATCT CCTTGCTGCT TCGTCGTCCA CCAGGTCGTG AAGCCTATCC TGGCGACGTA TTCTACCTCC ACTCCCGTTT GTTGGAGCGT GCTGCGCGTG TAAACGCTGA GTATGTTGAG GCCTTTACCA AGGGTGAAGT GAAAGGTAAA ACAGGTTCTT TAACCGCATT ACCTATCATT GAAACTCAGG CAGGTGACGT TTCTGCGTTT GTTCCGACCA ACGTAATATC GATTACAGAT GGTCAGATCT TCCTGGAATC CAGCCTGTTT AACGCCGGTA TTCGTCCTGC CGTTAACCCA GGTATCTCCG TATCCCGTGT GGGTGGTGCA GCGCAGACCA AGATCATGAA AAAACTGTCC GGTGGTATTC GTACCGCTCT GGCACAGTAT CGTGAGCTTG CAGCGTTCTC CCAGTTCGCA TCCGATTTGG ATGATGCAAC ACGTAAACAG CTGAGCCATG GTCAGAAAGT GACCGAGCTT CTGAAACAGA AACAATATGC GCCGATGTCG GTTGCACAGC AGTCTCTGGT TCTGTTCGCA GCTGAACGTG GTTATCTGGG TGATGTCGAG TTGGCGAAGG TGGGTAGCTT TGAAGCTGCA CTGTTGGCAT TTGCTGACCG TGAGCATGCT GAGCTTCTGC AACAAATCAA CCAAACTGGC GCGTATAACG ATGAGATCGA GGCCAAGCTG AAAGGCATCC TCGATACATT TAAGGCAACC CAGTCCTGGT AA
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Protein sequence | MQLNSTEISE LIKQRIAQFN VVSEAHNEGT IVSVSDGIIR VHGLADVMQG EMIALPGNRY AIALNLERDS VGAVVMGPYA DLAEGMKVKC TGRILEVPVG RGLLGRVVNT LGEPIDGKGS IENDGFSAVE AIAPGVIERQ SVDEPVQTGY KSVDAMIPIG RGQRELIIGD RQTGKTALAI DAIINQRDSG IKCVYVAIGQ KASTVANVVR KLEEHDALAN TIVVVATASE SAALQYLAPY SGCAMGEYFR DRGEDALIIY DDLSKQAVAY RQISLLLRRP PGREAYPGDV FYLHSRLLER AARVNAEYVE AFTKGEVKGK TGSLTALPII ETQAGDVSAF VPTNVISITD GQIFLESSLF NAGIRPAVNP GISVSRVGGA AQTKIMKKLS GGIRTALAQY RELAAFSQFA SDLDDATRKQ LSHGQKVTEL LKQKQYAPMS VAQQSLVLFA AERGYLGDVE LAKVGSFEAA LLAFADREHA ELLQQINQTG AYNDEIEAKL KGILDTFKAT QSW
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