Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_4187 |
Symbol | |
ID | 6087438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 4618304 |
End bp | 4618894 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641599286 |
Product | phosphatase |
Protein accession | YP_001722899 |
Protein GI | 170026394 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGTATA TCTTTGATCT AGGGAATGTG ATTGTTGATA TCGACTTCAA ACGTGTTTTA GGTGTTTGGA GCAAATTAAG CAGTGTTCCG TTGGCTACAT TGAACGAGCG TTTTACGATG GGAGAGGTAT TTCAGCAACA TGAGCGTGGT GAAATCAGCG ACGAGGATTT TGCCCACCAG CTCAGTGATG AAATGGGGAT ATCCTTGAGT TTCGAGCAGT TCGCTGAGGG TTGGCAGGCG ATATTCGTCG CTTTGCGGCC AGAAGTTATT GATATAATGA ATAAATTGCG TCGTGAAGGG AATCGTGTTG TTGTGTTATC GAATACCAAC CGCTTACATT GTTATTACTG GCCAGAGCAC TATCCTGAAG TCGCTGCTGC TGCTGATCAC ATGTATTTGT CACAGGATTT GGGAATGCGT AAACCGGAGG CCAGAATTTA TCAGCATGTA CTGAATGCTG AAAATGTACC GGCAGAGCAG GCCGTGTTCT TTGACGATGT CGAAGCGAAT GTACTCGCCG CCAAGGCTGT TGGTATAAAT GCTATTCACG TCACCGATAG ACAAATTATT CCTACTTATT TTTCCTTATA A
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Protein sequence | MLYIFDLGNV IVDIDFKRVL GVWSKLSSVP LATLNERFTM GEVFQQHERG EISDEDFAHQ LSDEMGISLS FEQFAEGWQA IFVALRPEVI DIMNKLRREG NRVVVLSNTN RLHCYYWPEH YPEVAAAADH MYLSQDLGMR KPEARIYQHV LNAENVPAEQ AVFFDDVEAN VLAAKAVGIN AIHVTDRQII PTYFSL
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