| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_4173 |
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| Symbol | |
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| ID | 6087295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 4599283 |
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| End bp | 4601274 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641599272 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_001722885 |
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| Protein GI | 170026380 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.219897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTCCAGA TAAATGACCT GACGGATTTA CAAGGACTTT CTGAATCATC TGAATTGGAA
TTTAAACTCG CTCAGGGTAA AGATGGCACA GGAAAACTAC CCGATGATTT CTGGCCCACC
TATAGCGCCA TGGCAAACTG CCGTGGTGGG TGTGTAGTGC TAGGGATTAA AGAGAAGAAA
GGCGTGTTCA GTATTGCAGG TATTGAGGAT GTCAATATTG TCAAAAAGCA ATTATTTGAC
CTCGTGGGTA ATAGAAAGAA GGTCAATGTT AATCTGCTAA CAGACCAACA CGTACAAGTT
ACAACCCTAG AAGGTAAGAA TATAATAGTA GTATCCATAC CAATTGCCAG ACGCGAACAG
AAACCGATTT ACCTCAACAA TCAACCAATG ACAGAGACAT GGATTCGTTC CCATGAAGGT
GACCACCGTT GCTCAGAAGA GCAAGTGCGC CGGATGATGG CAGAACAAGT TGAAGAAAGC
CGGGATAACC GAATCGTCGC AAATTTCGAT ATGAGTGATA TTACGATTGA AAGCCTTCAG
GCTTATCGCA ACCTGCTTTC AGCATCTAAT CCTACTCACC CAGCCCTCGA ACTGGATAAC
TTTGCTTTCC TGCGGAGCAT TGGAGGGTGG CGTAAGGATC GTCAGACTGG AGTAGAAGGC
ATGACTCTCG CTGGGGTTCT AATGTTCGGA ACATGGGAAG CGATTCAAGA TATAGCTCCA
AATTATTTTG TGGATTATCA GGAACGCCCG GAAGCCAAAA CGGAACGCCG CTGGGTAGAC
CGTATTTGCC CTGATGGCAC GTGGTCTGGA AATGTTTTTG ATTTTTATAG GCGAACTTAC
CGCAAGCTGA TTGCAGACTT AAAAATCCCC TTTGAGCTGA AAGATGGCAT CCGCCAAGAT
GATACACAGA TCCATACCGC TTTACGTGAA GCTCTGGTAA ACACACTGGT ACATGCTGAC
TACACAGGGC GGACTCATAT CCTCGTGGTG AAACGGCCCG ACCTATTCGG CTTTCGTAAC
CCCGGTACTA TGCGAGTCCC TCCAGAGCAG GCCATAAAGG GATATGAAAG TGACTGCCGT
AATCGACTCA TGCATCAAAT GTTTCTAATA ATCGGCGCAG GTGAGCGTTC CGGATCTGGA
ATACCTAAGA TTTTTAGTGG CTGGAAATGG GCCGACTGGC GTATACCTCG ACTTTATGAA
AAGACAGAAC CTGAACAGAC TCTACTCGAA CTGTCCATTG GAAATTTGGT TTCCGAAGAA
ACAGCCTTTC TTTTGCACTA TAAGTTCGGA GAGCGCGTAG ATAGTCTGAG CGAACTTGAG
CGCGGTATAG TCATTACTGC GGCAGTTGAA GGCTGGATTG ATCATGAGCG GGCATGCCAA
CTAACCAGCC TTCACTCACG AGAAGTTACA CTTACACTAC CGAGGTTAGT AAGCAACGGT
TTTCTAATCC CTCATGGTGA GAAAAGAAAC AAATCTTACA CGCTACCAGG CGAGGAACTA
CCTTCACCAG ACGAAGTGTT TGCAATAAAT CCGTTATCAC CTGAGCATCT CATGGCAAAG
AATAAAGAAA TCATAACGGA TAATGGGGAA ATGATAACGG ATAGCAACAC GCTGATCACG
GATAGTGACA AATACATAAC AGATAACGGG CAAGAACGTG ACTCGTTAGG ACGTTTTATC
AGTGAAAAAC TACCTCATCC ATATATAGAT AATTTCACCT GTTTATCTTT AAGCTTACAG
CAAGAACTAA ACGACATATC TAAGCTTGCA CGGGAGAAGA AACGCCTACC CAACGAAATC
ATGGATAATA TTGTACTTAC ATTATGCAAA GGACATTTTA TTCCACTAAG CATAATAGCC
ATGCTGACAT CACGCACTCC ACAGAACATT CGAGAAAAGC AAATCGTACC GCTAGTTGAA
CAAGGGAAAA TACGCTTAGC TTTCCCCCAC GCACGAAAAC ATAAAAAACA GGGGTATATC
GCTAATGAGT GA
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| Protein sequence | MFQINDLTDL QGLSESSELE FKLAQGKDGT GKLPDDFWPT YSAMANCRGG CVVLGIKEKK
GVFSIAGIED VNIVKKQLFD LVGNRKKVNV NLLTDQHVQV TTLEGKNIIV VSIPIARREQ
KPIYLNNQPM TETWIRSHEG DHRCSEEQVR RMMAEQVEES RDNRIVANFD MSDITIESLQ
AYRNLLSASN PTHPALELDN FAFLRSIGGW RKDRQTGVEG MTLAGVLMFG TWEAIQDIAP
NYFVDYQERP EAKTERRWVD RICPDGTWSG NVFDFYRRTY RKLIADLKIP FELKDGIRQD
DTQIHTALRE ALVNTLVHAD YTGRTHILVV KRPDLFGFRN PGTMRVPPEQ AIKGYESDCR
NRLMHQMFLI IGAGERSGSG IPKIFSGWKW ADWRIPRLYE KTEPEQTLLE LSIGNLVSEE
TAFLLHYKFG ERVDSLSELE RGIVITAAVE GWIDHERACQ LTSLHSREVT LTLPRLVSNG
FLIPHGEKRN KSYTLPGEEL PSPDEVFAIN PLSPEHLMAK NKEIITDNGE MITDSNTLIT
DSDKYITDNG QERDSLGRFI SEKLPHPYID NFTCLSLSLQ QELNDISKLA REKKRLPNEI
MDNIVLTLCK GHFIPLSIIA MLTSRTPQNI REKQIVPLVE QGKIRLAFPH ARKHKKQGYI
ANE
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