Gene YPK_4142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_4142 
Symbol 
ID6089371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4573864 
End bp4575234 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content50% 
IMG OID641599241 
Producthypothetical protein 
Protein accessionYP_001722854 
Protein GI229597227 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG4942] Membrane-bound metallopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGATA GAGAGTTATT GGCGAAATCA ATAACTACGA AAGATGCCGT CTCTGACGGT 
AGAGAGTCTC CCTCTCTGCT GTCAGATAAG TTGAGTCGTC TACCGTGGTC AACACTCTAT
GCCAGCGTTT TTTGTGCTGG CGTACTGTTA TTGCCATTTT CTGGTCAGGC TGTCGAACCC
CCTGTCGCGG CCAAAGCATC AGAGAATAAA AACCAACTCA AAACCCTCCA ACAGGATATC
GCTGAAAAAG AAAAAAGTGT TCAGCAACAA AAAAAACAAC GCAGTTCATT GCTGGATCAA
CTAAAACAGC AAGAAAACAC AATTTCTCAG ACCAGCCGCA GCCTGCGCGA GACCCAAGCG
ACCCTGGCTG AACTGAGTAA AGATGTTGCC AGCCTCACGA CCACGATTGA AAAACTGCAA
AATCAGCAGT CGCAACAGCA AAGTATTCTG TCTAAACAAC TTGCAGCGGC GTTTAAACAA
GGCAAACACA GTAGCTTACA ACTTATTTTA AGTGGCGAAG AGAGCCAGCG CAGTGAGCGT
ATTCTGGCTT ATTTCAGTTA CCTGAATGAA GCTCGGCAAA AAGCCATTGA AGAGTTGAAG
CAGACACGTA CCACGCTGTC TGCAGAGAAA AAAACGCTGG AGCAAAAACA GAATCAACAC
AAGGCATTGC TGGATGAACA GAAAGCGCAA CAACAGAAGC TGGAACAAGC GCGTATTGCC
CGCCAAAAAA CCCTGACATC GCTGGAAGCC TCGCTGGAGA AAGATCAGCA GAGTTTGGCG
GAGTTAAAGT TGAACGAAAG CCGTTTACGT GACCAAATCG CCAAAGCAGA ACGGGAAGCC
AAAGCTCGGG CTGAACGGGA GGCCAAAGAA GCGGCCCGTG TGCGTGAACA GGTAAAAGTC
AAAGAGCAGC AAGCGAAGAA GACCGGTAGC AGTTATAAAC CAAGTGAAAG TGAGCGCTCA
TTGATGGCGC GCACCGGCGG CTTGGGCCGT CCTGGCGGTC AAGCCCTATG GCCCGTTCGT
GGTAACGTGT CCCACCGTTT CGGTGAACCC CTACAAGGTG AACTACGCTG GAAAGGGATG
GTTATCACCG CACCTGAAGG CAGCGAAGTC AAAGCCATCG CCGATGGCCG TGTTTTACTG
GCTGACTGGT TACAAGGTTA TGGCTTGGTG GTCGTTATCG AGCATGGGAA AGGGGATATG
AGTTTGTATG GCTACAACCA AAGTGCCTTG GTCAATGTTG GCGCTCAGGT TAAAGCGGGC
CAGCCTATCG CACTTGTGGG TACCAGCGGT GGGCAGGGCG AGCCATCGCT CTATTTCGAA
ATCCGCCGTC AGGGACAAGC CGTTAACCCA CAGCCCTGGT TAGGAAGATA G
 
Protein sequence
MKDRELLAKS ITTKDAVSDG RESPSLLSDK LSRLPWSTLY ASVFCAGVLL LPFSGQAVEP 
PVAAKASENK NQLKTLQQDI AEKEKSVQQQ KKQRSSLLDQ LKQQENTISQ TSRSLRETQA
TLAELSKDVA SLTTTIEKLQ NQQSQQQSIL SKQLAAAFKQ GKHSSLQLIL SGEESQRSER
ILAYFSYLNE ARQKAIEELK QTRTTLSAEK KTLEQKQNQH KALLDEQKAQ QQKLEQARIA
RQKTLTSLEA SLEKDQQSLA ELKLNESRLR DQIAKAEREA KARAEREAKE AARVREQVKV
KEQQAKKTGS SYKPSESERS LMARTGGLGR PGGQALWPVR GNVSHRFGEP LQGELRWKGM
VITAPEGSEV KAIADGRVLL ADWLQGYGLV VVIEHGKGDM SLYGYNQSAL VNVGAQVKAG
QPIALVGTSG GQGEPSLYFE IRRQGQAVNP QPWLGR