| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_4131 |
|---|
| Symbol | cpxP |
|---|
| ID | 6089689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 4563793 |
|---|
| End bp | 4564281 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641599230 |
|---|
| Product | periplasmic stress adaptor protein CpxP |
|---|
| Protein accession | YP_001722843 |
|---|
| Protein GI | 170026338 |
|---|
| COG category | [N] Cell motility
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00000337772 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAAAG TTACAACATT AGTTATGGCG TCAATGTTCG TTCTTGGTTC TTCAGCCGCC
TTTGCTGCCG ACAACACTAA AGTCACTGAG GGTTACCACG GTGACGGTAA GATGATGATG
AACAAGAAAG GCGACCGCGG TCACCATAAC ATGTTTGATG GCATCAACCT CACTGAACAG
CAGCGTCAGC AAATGCGTGA CTTGATGCGC CAGTCTCACC AAAGTCAGCC GCGCCTTGAT
CTTGAAGATC GCGAGGCAAT GCACAAATTG ATTACTGCCG ATAAATTCGA CGAAGCTGCT
GTAAGAGCGC AGGCTGAGAA AATGTCTCAG AACCAGATTG AGCGCCATGT CGAAATGGCC
AAAGTTCGTA ACCAAATGTA TAACTTGCTC ACACCAGAGC AAAAGGAAGC ATTGAACAAA
AAGCATCAGG AACGTATTGA GAAATTGCAG CAAAAACCAG CAGCACAACC TTCTTCTGCC
CAGAAGTAA
|
|---|
| Protein sequence | MRKVTTLVMA SMFVLGSSAA FAADNTKVTE GYHGDGKMMM NKKGDRGHHN MFDGINLTEQ
QRQQMRDLMR QSHQSQPRLD LEDREAMHKL ITADKFDEAA VRAQAEKMSQ NQIERHVEMA
KVRNQMYNLL TPEQKEALNK KHQERIEKLQ QKPAAQPSSA QK
|
|---|
| |