Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_4121 |
Symbol | |
ID | 6089566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 4554933 |
End bp | 4555646 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641599220 |
Product | hypothetical protein |
Protein accession | YP_001722833 |
Protein GI | 170026328 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0684] Demethylmenaquinone methyltransferase |
TIGRFAM ID | [TIGR02798] 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCTGG TTAATATGAA AGGGGTCGTG GTCACAAACA TTGAACGAGC TGAACTAGCC CTGTTACAAC GTTTCGCTGA ATATGGCGTG GCAACAGTGC ATGAAGCTCA ACTGCGGCAG GGACTATTGG ATGAGCGAAT TAAACCTATT CAGCAAGGGC GCTGTATTGC TGGCAATGCG GTGACGGTAT TGGTTACACC CGGAGATAAC TGGATGTTCC ATGTTGCCGT AGAGCAGTGT CAGCCTGGCG ATGTGTTGCT CGTTGCGCCG ACCTCCGAAT GCCATGATGG CTTTTTTGGT GACCTGCTCG CGACCTCACT GCTGGCGCGC GGCGTGGTGG CATTGGTTGG AGATATCGGG ATCCGAGATA GCCAGACGCT GCGCGAAATG AATTTCCCTG TGTGGTCGCG TGCGGTTTGG GCACAAGGTA CGGTGAAAGC CTCGCTTGGC TCGGTCAATG TGCCGGTGAT CTGCGCGGGT CAGTTGGTCA ACCCCGGCGA TATTGTGGTG GCAGACGATG ATGGCGTAGT CATTGTGCCA AGAGAACAAG CCACCGCGAT TGCTGATGCG GCACAGACAC GGGTAGATCT TGAAACGAGC AAACGTCAGC GTCTGGCTAA TGGCGAGCTC GGGCTGGATA TCTATCAAAT GCGTGCCCCT CTGGCGAAAA AAGGGCTGCG TTACGTCAAT AGTCTCAACG CGTTAAAGTC ATAA
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Protein sequence | MSLVNMKGVV VTNIERAELA LLQRFAEYGV ATVHEAQLRQ GLLDERIKPI QQGRCIAGNA VTVLVTPGDN WMFHVAVEQC QPGDVLLVAP TSECHDGFFG DLLATSLLAR GVVALVGDIG IRDSQTLREM NFPVWSRAVW AQGTVKASLG SVNVPVICAG QLVNPGDIVV ADDDGVVIVP REQATAIADA AQTRVDLETS KRQRLANGEL GLDIYQMRAP LAKKGLRYVN SLNALKS
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