Gene YPK_4116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_4116 
Symbol 
ID6088390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4550497 
End bp4550865 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content52% 
IMG OID641599215 
Producthypothetical protein 
Protein accessionYP_001722828 
Protein GI170026323 
COG category[S] Function unknown 
COG ID[COG3152] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGCTGT GGCTACTGGC AATGCTGGTT ATTTTTACGT TGGCGGGGAA GGAGTGGCTC 
CCGATTCAGT CAGCCTCGTT TGCGCTTGTT TTCTTACTGT GGCCAACGGC CACCGTCGTC
GTCAAGCGGC TACATGATCG TAATAAAGCA GGCTGGTGGG CATTGTTGGC GGTGCTAGCC
TGGATGCTGA TGGCTGGAAA TTGGCAGATG CTGACGCCTA TTTGGCAATG GGGGGTTGGG
CGATTTATCC CTACGCTTAT TTTTGTCATG ATGTTTATCG ACTGCGGTGC TTTTCTTGGG
ACAGAAGGTG ATAACCGCTT TGGCCGAGAA GCGGTGCCAG TGAAATTTTT CGCTGATAAG
GCGAAGTGA
 
Protein sequence
MGLWLLAMLV IFTLAGKEWL PIQSASFALV FLLWPTATVV VKRLHDRNKA GWWALLAVLA 
WMLMAGNWQM LTPIWQWGVG RFIPTLIFVM MFIDCGAFLG TEGDNRFGRE AVPVKFFADK
AK