Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_4093 |
Symbol | metF |
ID | 6091061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 4523439 |
End bp | 4524323 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641599192 |
Product | 5,10-methylenetetrahydrofolate reductase |
Protein accession | YP_001722805 |
Protein GI | 170026300 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0685] 5,10-methylenetetrahydrofolate reductase |
TIGRFAM ID | [TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTTTT TTCACGCAAA CCAGCGAGAA GCGCTGAACC AGAGTCTGTC TGAGCTACAA GGTCAGATTA ATGTTTCTTT TGAGTTCTTC CCGCCGCGCA CCAGCGAGAT GGAGGATACC CTGTGGAGCT CGATTGATCG TCTTAGCACG TTGAAACCTA AATTTGTTTC CGTGACCTAT GGGGCGAACT CGGGTGAGCG TGACCGTACT CACAGCATCA TCAAAGGGAT TAAGGAGCGC ACAGGCCTGG AAGCTGCGCC GCATCTGACC TGTATTGATG CTTCTCCGAC TCAGTTGCGT GATATCGCGA TTGACTACTG GAATAGCGGT ATCCGACATA TCGTTGCCTT ACGGGGTGAT TTGCCGCCAA ACAGCGGAAA ACCCGAAATG TATGCCTGCG ATTTGGTGGG TTTGCTAAAA GATGTGGGTG ATTTTGATAT CTCCGTGGCG GCGTACCCAG AAATTCATCC AGAAGCGAAA AGCGCCCAAG CTGACTTGAT CAATCTGAAA CGTAAGATTG ATGCAGGTGC TAACCGGGCC ATCACCCAAT TTTTCTTTGA CGTTGAGAGT TACCTGCGTT TTCGTGACCG CTGTGTTGCC ACCGGGATTG ACGTTGAGAT CGTACCGGGC ATTTTGCCGG TTTCTAATTT TAAGCAGTTA CAGCGTTTTG CCACCATGAC CAATGTACGG GTCCCAAATT GGATGACATC TATTTTTGAC GGTCTGGATA ATGACCCAGA GACGCGCAAA ATGGTGGGGG CATCGGTCGC GATGGACATG GTGAAGATCC TCAGCCGCGA AGGGGTGAAG GATTTCCATT TTTATACTTT GAACCGGGCT GAGTTGAGTT ATGCGATTTG TCATACCCTT GGGGTGAGGC CTTAG
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Protein sequence | MSFFHANQRE ALNQSLSELQ GQINVSFEFF PPRTSEMEDT LWSSIDRLST LKPKFVSVTY GANSGERDRT HSIIKGIKER TGLEAAPHLT CIDASPTQLR DIAIDYWNSG IRHIVALRGD LPPNSGKPEM YACDLVGLLK DVGDFDISVA AYPEIHPEAK SAQADLINLK RKIDAGANRA ITQFFFDVES YLRFRDRCVA TGIDVEIVPG ILPVSNFKQL QRFATMTNVR VPNWMTSIFD GLDNDPETRK MVGASVAMDM VKILSREGVK DFHFYTLNRA ELSYAICHTL GVRP
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