| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_4073 |
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| Symbol | btuB |
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| ID | 6091361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 4496731 |
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| End bp | 4498623 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641599172 |
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| Product | vitamin B12/cobalamin outer membrane transporter |
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| Protein accession | YP_001722785 |
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| Protein GI | 170026280 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | [TIGR01779] TonB-dependent vitamin B12 receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000943492 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAATTA AAAATACAAT GACAATTAAA AAATATACGC TGCTCACAGC CCTTTCTGTG
ACGGCATTTT CTGGCTGGGC GCAGGGTAAT AACACCACGG ACAACAATAA TGAAATGGTT
GTAACAGCCA ACCGTTTTCC ACAACCGAAA AGTAGTGTAT TAGCGCCTGT CGATGTAGTC
ACTCGTGCCG ATATTGATCG CTGGCAATCT ACAAATATAA ATGATGTCTT ACGCCGCTTA
CCGGGTATCA ATATTGCCCA ATATGGTGGG CCAAGACAGC TGAGCTCGCT ATTTATCCGG
GGGACCAATT CTAGCCATGT CTTGGTTCTG GTCGATGGTG TTCGCCTTAA TCAGGCCGGT
ATCAGTGGTT CTTCAGACCT AAGCCAAATC CCTATCTCAT TAGTGCAACG TATCGAGTAT
ATCCGCGGGC CACGTTCAGC TGTGTATGGT TCTGATGCTA TTGGGGGGGT AGTAAACATT
ATCACTGAGC GTGAAACGTT GGGAAGTACC CTCACGGCAG GGTTAGGTTC GAACGGTTAT
CAAAATTACA ATGGCTCAAC GCAGCAAAAA CTGGGTGACG ACACAACAAT CACTTTGGCT
GGCAATTACG ATTACAGCAA AGGTTATGAT GTGGTTGCCA AGGGAAATAC TGGCATGGCC
AGTCAGCCAG ATCGTGACGG TTATCTCGGG AAAATGTTGT GGCTGGGCGC TAACCACAAA
TTTAATGAGC AATTCAGCGG TTTTGTCCGT GGCTATGGTT TTGATAATCG TAGTGACTAC
GACAGTTATT ATTATCCGGG TAGCCCTCTG GTAGATACAC GATCACTATC TAGCCGAACA
TATGATACTG GAATAAATTT CAGTAATGGC GGTTATGCTT CTCAACTGAT TGGCAGTTAC
AGTCGAACTC AAGACTATAA TTATGATCCT AGCTATGGTC GCTATGATCA ATCAGCCACT
TTGGATGATA TTTCCCAATA CAATCTTCAG TGGACCAATA CCTATCAACT TGGCTTAGGT
AATGTAGGCG GCGGCCTTGA TTGGCAGAAA CAAACTACTG AGCCAGGTAC TAATTACTTA
TCCAATGGTT ATGAACAGCG AAATACCGGT GTTTACGGTA CCGTACAGCA ATTTGTCGGG
CCAGTAACAT TGGAAGGTGC TATTCGTGGT GATGACAACT CGCAGTTTGG CTGGCACACC
ACTTGGCAAA GTAGTGCTGG TTGGGAGTTT GTTGATGGCT ATCGTTTAAT CGGTTCTTAT
GGTACTGCAT TTAAGGCACC AAATTTGGGG CAGATATACA GTTCAACTTA CGGTAATCGG
GATCTTAAGC CAGAGGAAAG TACCCAATGG GAAGCCGCAA TTACGGGGAT CACGGGACCA
CTTGATTGGC GTTTATCGGC TTATCGTAAT GATATTGATC AGATGATTGC GACCAGAGGG
GTATATCCAA ACTCCCGCTA TTATAATGTG GAGAAAGCCA CGATTAAAGG TGTTGAATGG
ACAGGTTCGT TTGAGACTGG GCCGTTATCA CATCAAGTGA CGCTGGAATA TCTGGACCCA
CGTAATGCAG ATACCCACGA GATTCTGGCG CGCCGGGCCA AACAACAAGT TAAATATCAG
TTGGATTGGC AGATGGCTGA TTTGGATTGG TCCGTTACCT ACCAATATAT TGGCCAGCGT
TATGACAGTG TTTTCGATCC AATAACTTAT GCGGCAAGCC CGGTAAAGTT AGCTGGAATT
AGCCTCTGGG ATCTCGCTGT TTCGTATCCG GTCACATCTC ATCTCACGGT TCGTGGTAGA
ATTGCCAACC TGTTTGATAA AGATTATGAG ATGGTTTATG GCTACCAAAC CCCAGGACGC
GAATACTACT TCACGGGAAG CTATAACTTC TAA
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| Protein sequence | MIIKNTMTIK KYTLLTALSV TAFSGWAQGN NTTDNNNEMV VTANRFPQPK SSVLAPVDVV
TRADIDRWQS TNINDVLRRL PGINIAQYGG PRQLSSLFIR GTNSSHVLVL VDGVRLNQAG
ISGSSDLSQI PISLVQRIEY IRGPRSAVYG SDAIGGVVNI ITERETLGST LTAGLGSNGY
QNYNGSTQQK LGDDTTITLA GNYDYSKGYD VVAKGNTGMA SQPDRDGYLG KMLWLGANHK
FNEQFSGFVR GYGFDNRSDY DSYYYPGSPL VDTRSLSSRT YDTGINFSNG GYASQLIGSY
SRTQDYNYDP SYGRYDQSAT LDDISQYNLQ WTNTYQLGLG NVGGGLDWQK QTTEPGTNYL
SNGYEQRNTG VYGTVQQFVG PVTLEGAIRG DDNSQFGWHT TWQSSAGWEF VDGYRLIGSY
GTAFKAPNLG QIYSSTYGNR DLKPEESTQW EAAITGITGP LDWRLSAYRN DIDQMIATRG
VYPNSRYYNV EKATIKGVEW TGSFETGPLS HQVTLEYLDP RNADTHEILA RRAKQQVKYQ
LDWQMADLDW SVTYQYIGQR YDSVFDPITY AASPVKLAGI SLWDLAVSYP VTSHLTVRGR
IANLFDKDYE MVYGYQTPGR EYYFTGSYNF
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