Gene YPK_4045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_4045 
Symbol 
ID6089000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4463363 
End bp4464730 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content49% 
IMG OID641599142 
Producthypothetical protein 
Protein accessionYP_001722760 
Protein GI170026255 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.246264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAGAC CAACAAAGCC ATTAATATCT TCCGGCATTT CGCAGTCTAC CACTGCGGTC 
TATTGCCGCC GCCCATATTT TCTTGCTGGG ATGACATTAC TGATTGGGTT ATTTAGCACC
TCCGCATGGT CAAACTGCAC CCGTATTACC GCACAAAATC AGATAAGTTC CAGTGATGGT
ACCGCCGCTT CATGGTTGGG TTCCAGAGAC GATAATAATG GTTCGCTCAA CTTACCCAGT
ATTGTTGATC TCAGCACCAA TGCGAATTTT CAGCCCGATG GCACGTTACT GGCATCAGCA
ACCTCAGACT TTACGACCTT TGCAGTGAAT ACCGGTTATG CCCTTGACCA GGTCCTCTTT
CGCTGTGATG CGGCTGATGT GGATCAGCTC TATGAGATGT ATGCCACTAA CGGTGACAGC
ACTTATGGTG GCAGATATGA AGACGGCACG ATTGCAGGCA ATGTGTCCTA TGGCTATGCT
ACTACAGTGA TGAATGTGGT TATTCGGTTT ACCAACCTGG CAACGGGGGA GTATTACGCT
CGTATTTGGA AAGGCCGACG CTTAACCGGG CTTGATACTG ACAGTAGCGG ACGGATTTTA
GTTAAAGCGA AAAATTTCAG TAATGTGTAT ACCGAGCTAT TTCGTATTGA TTATGCCCGT
AGTGGCGCTA ACAATACGCC ATCTTATCTC TATGGACGTA GTCAGCCCAA TGCCTATATC
GCGTTTAAAG GGCCAGGAAT TACTGGCCCG ATTGAGGGTA CTGACTCGTA CTCAAACTGG
CCCGGTTGGT ATTCTACCTG GCCTGCATCA CTTGGTTTGT ACAAATACGT CACATTCCGC
CGGACCACTA TTTGTGCGGT AAGCAACTTT ACCCCGACGG TCGTGTTACC CAGGATTTCG
GTGGCAGAAC TGAATAATGG GAATACCAGC TCTGCTGATT TTAATGTGGA TTTTCAGTGC
CAGACCGGGA TTAACTCTGG CGTGACGGCT GGCACAGTGG CGATGGGATT TTTAGTGCCG
GCGGCCAATG CAGCCAAAGC TCAGGCGCTG GGGTTAATGA ACGGCAACGG GGGAGTAAGC
CATTTGGTCT CCGATAACTA TGGCGCTGCT GGCACCGCGG GCGGGGTGGG TATTCGCATC
TACCGTAACA ATAGCCCGAT GTATCTACTG TCAAAAAACG TAACTCAGAC AGGTAACAAT
GGGGGGTGGT ATGGTATCTT ACAGGGCGCA CAAGAAACCA CAGGCAGCGT AGATGGGGGG
AACAGTTACA CCGAAACTTT CCGTGCTGAG TTAAGCAAAA TAAGCGGGCA AACAGTGACC
GCCGGAGCAG TGAATGCACA TGCGCAAGTG GTTATCCGTG TCCAATAA
 
Protein sequence
MLRPTKPLIS SGISQSTTAV YCRRPYFLAG MTLLIGLFST SAWSNCTRIT AQNQISSSDG 
TAASWLGSRD DNNGSLNLPS IVDLSTNANF QPDGTLLASA TSDFTTFAVN TGYALDQVLF
RCDAADVDQL YEMYATNGDS TYGGRYEDGT IAGNVSYGYA TTVMNVVIRF TNLATGEYYA
RIWKGRRLTG LDTDSSGRIL VKAKNFSNVY TELFRIDYAR SGANNTPSYL YGRSQPNAYI
AFKGPGITGP IEGTDSYSNW PGWYSTWPAS LGLYKYVTFR RTTICAVSNF TPTVVLPRIS
VAELNNGNTS SADFNVDFQC QTGINSGVTA GTVAMGFLVP AANAAKAQAL GLMNGNGGVS
HLVSDNYGAA GTAGGVGIRI YRNNSPMYLL SKNVTQTGNN GGWYGILQGA QETTGSVDGG
NSYTETFRAE LSKISGQTVT AGAVNAHAQV VIRVQ