| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_4038 |
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| Symbol | |
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| ID | 6089892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 4454995 |
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| End bp | 4457016 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641599135 |
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| Product | ATP-dependent DNA helicase Rep |
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| Protein accession | YP_001722753 |
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| Protein GI | 170026248 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01074] ATP-dependent DNA helicase Rep |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGATTAA ACCCCAGCCA ACAAGAAGCC GTCGAATTTG TCACTGGACC CTGTCTGGTG
CTGGCCGGTG CGGGATCGGG TAAAACCCGA GTCATTACCA ACAAGATTGC CCACCTGATC
CGTCAGTGTG GTTATCAGCC TAAGCATATT GCTGCCGTGA CCTTCACCAA TAAAGCAGCC
CGCGAGATGA AAGAGCGTGT TGCTCAAACG CTGGGGCGCA AAGAAGCGCG GGGGTTGATG
ATCGCGACTT TCCACACCTT GGGGTTGGAA ATCATCAAGA AAGAGTATGT GGCTCTGGGG
ATGAAGTCGA ACTTCTCACT GTTCGATGCA CAGGATCAAA TGGGGTTATT GAAAGATCTG
ACCCATAAGT GGCTGGAAGA TGACAAAACA TTGCTGCAGC AACTGGTGTC GGCGATCTCC
AATTGGAAGA ATGATCTGCT GGATCCAGCC GCCGCTGCTG CGACAGCACG ATCCGAGCGT
GATAAGTTAT TTGTCCATTG CTACGGCTTA TATGACGCCC ATTTGAAAGC CTGTAATGTG
CTGGATTTTG ACGACCTTAT CTCGCTACCC ACCCTATTGT TGCAAAAAAA TCTGGAGGTC
CGTGAGCGGT GGCAAAACCG TCTGCGTTAC CTACTGGTTG ATGAATATCA GGATACCAAT
ACCAGCCAGT ATCAAATGGT GAAATTGCTG GTGGGGAATC GGGCGCGTTT TACTGTCGTG
GGTGATGACG ACCAATCTAT CTATTCATGG CGTGGTGCTC GGCCACAGAA CTTGGTCCTG
CTAAATGAAG ATTTCCCTGC GCTACGGGTG ATTAAGCTGG AACAGAATTA CCGTTCTTCG
GGGCGTATCT TGAAGGCGGC GAATATTTTG ATTGCCAACA ACCCACATGT TTTTGAAAAG
AAACTTTTTT CTGAACTGAG CTATGGCGAT GAGTTGAAAG TGATTACCGC CAATAACGAA
GATCATGAAG CGGAGCGGGT GGTCGGCGAG CTTATTGCAC ATCACTTTGT TAAAAAGACC
CAATATAGCG ATTACGCCAT TTTGTATCGT GGGAATCACC AATCGCGGTT GTTTGAAAAA
TTGCTGATGC AAAACCGTAT TCCTTATCGA ATTTCGGGTG GCGATTCATT TTTCTCTCGT
CCAGAGATTA AGGATTTGTT GGCTTACCTA CGGGTATTGA CCAATCAGGA TGATGACAGT
GCATTCTTAC GAATTGTGAA TACACCAAAG CGTGAGATTG GTGCGGCCAC CGTCCAAAAA
TTGGGTGAAT GGGCTAATTT ACGCAATAAG AGCCTGTTTC GGGCCAGTTT TGATTTAGGG
TTAGGCGAGC ACCTGAAGGG CCGTGGCCTG GAGTCATTGC AACGTTTTAC TCACTGGATG
GATGGGATTA TTCGTTTGGT TGAGCGTGAA CCCGTGGCAG CAGTCCGGGA TTTGATCCAC
GGTATTGATT ACGAAAGTTG GTTATTCGAA ACCGCGCCCA GCCCAAAAGC CGCTGAAATG
CGTATGAAAA ACGTTAATTT ATTATTCAGT TGGATGACCG AAATGCTGGA AGGGTCGGAA
CTGGATGAAC CGATGACGCT GACTCAGGTG GTAACGCGTT TTACCCTGCG TGACATGATG
GAGCGAGGGG AGAGTGATGA AGAACTGGAT CAAGTGCAAT TAATGACGTT GCATGCCTCT
AAAGGGCTGG AGTTCCCTTA TGTATTCTTA GTGGGGATGG AAGAGGGGTT GCTGCCGCAT
CAAAGCAGCA TTGATGAAGA TAATGTGGAT GAAGAACGGC GGTTGGCTTA TGTGGGGATC
ACCCGCGCCC AGCGTGAACT GTTCTTCACC CTGTGTAAAG AACGGCGGCA ATACGGCGAG
TTGATTCGGC CAGAACCTAG CCGTTTTCTG ATGGAGTTGC CGCAGGACGA TTTAAACTGG
GAAAACGAAC GTAAAGCCGT CAGCCCGGAA GAGCGTATGC AAAAAGGCCA GAGTCATCTG
GCCAATCTTC GTGCTCAGTT AGCGAATGCG AAGAAACCGT AG
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| Protein sequence | MRLNPSQQEA VEFVTGPCLV LAGAGSGKTR VITNKIAHLI RQCGYQPKHI AAVTFTNKAA
REMKERVAQT LGRKEARGLM IATFHTLGLE IIKKEYVALG MKSNFSLFDA QDQMGLLKDL
THKWLEDDKT LLQQLVSAIS NWKNDLLDPA AAAATARSER DKLFVHCYGL YDAHLKACNV
LDFDDLISLP TLLLQKNLEV RERWQNRLRY LLVDEYQDTN TSQYQMVKLL VGNRARFTVV
GDDDQSIYSW RGARPQNLVL LNEDFPALRV IKLEQNYRSS GRILKAANIL IANNPHVFEK
KLFSELSYGD ELKVITANNE DHEAERVVGE LIAHHFVKKT QYSDYAILYR GNHQSRLFEK
LLMQNRIPYR ISGGDSFFSR PEIKDLLAYL RVLTNQDDDS AFLRIVNTPK REIGAATVQK
LGEWANLRNK SLFRASFDLG LGEHLKGRGL ESLQRFTHWM DGIIRLVERE PVAAVRDLIH
GIDYESWLFE TAPSPKAAEM RMKNVNLLFS WMTEMLEGSE LDEPMTLTQV VTRFTLRDMM
ERGESDEELD QVQLMTLHAS KGLEFPYVFL VGMEEGLLPH QSSIDEDNVD EERRLAYVGI
TRAQRELFFT LCKERRQYGE LIRPEPSRFL MELPQDDLNW ENERKAVSPE ERMQKGQSHL
ANLRAQLANA KKP
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