| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_4016 |
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| Symbol | hemC |
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| ID | 6091355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 4428363 |
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| End bp | 4429304 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641599110 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001722732 |
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| Protein GI | 170026227 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.602391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGACA AAATTATTCG AATTGCCACA CGACAAAGCC CGCTCGCCTT ATGGCAAGCA
CATTATGTTC AACATTTATT GCAAGCCAAT CACCCTGGTC TGCAAATCGA ACTGGTCCCA
ATGGTCACCC GTGGGGATAT CATTTTGGAT ACACCATTGG CCAAAGTCGG TGGTAAGGGT
TTATTTGTCA AAGAATTAGA GCTGGCGCTG CTGGACGGCA GAGCTGATAT TGCCGTGCAT
TCGATGAAAG ATGTGCCCAT TGCTTTCCCC GAAGGGTTGG GTTTAGTCAC GATTTGTGAA
CGTGAAGACC CGCGCGATGC TTTCGTCTCG TCACATTATA CGCATCTGGA TGATCTCCCT
GCAGGCAGTG TTGTCGGTAC CTCCAGCCTG CGCCGCCAGT GTCAGCTACG CGAACGGCGA
CCAGACCTGA TTATCCGCGA TCTACGGGGC AACGTCGGTA CCCGCCTTGC CAAACTGGAT
AATGGTGACT ATCAGGCTAT TATTCTGGCT GTCGCGGGTC TCAAGCGCCT CGGTCTGGAA
AACCGAATTC GCTATGCCAT GTCAGCGGAG GAGTCCCTCC CGGCTGTCGG CCAAGGTGCC
GTAGGTATCG AATGCCGTCT GGATGATGGC CATACCCGCC AGTTGCTGGC TCCGTTGAAC
CATCGGCACA CCGAATTACG GGTCTGTGCG GAGCGGGCAA TGAATATTCG CCTTGAAGGG
GGTTGCCAAG TCCCGATCGG TAGCTACGCT GAACTGGAAG GTGATACTTT ATGGCTACGG
GCGCTGGTGG GAGCACCTGA TGGCAGCCAA ATGATCCGGG GTGAACGCCG TGGTCCGGCG
GCAGAGGCTG AGCAGATGGG CATTGAACTT GCCGATGAGT TGCTATCACG CGGCGCACGA
GAAATCCTGG CGGCGGTTTA TCTGGATAAT CCTGCGCGAT GA
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| Protein sequence | MLDKIIRIAT RQSPLALWQA HYVQHLLQAN HPGLQIELVP MVTRGDIILD TPLAKVGGKG
LFVKELELAL LDGRADIAVH SMKDVPIAFP EGLGLVTICE REDPRDAFVS SHYTHLDDLP
AGSVVGTSSL RRQCQLRERR PDLIIRDLRG NVGTRLAKLD NGDYQAIILA VAGLKRLGLE
NRIRYAMSAE ESLPAVGQGA VGIECRLDDG HTRQLLAPLN HRHTELRVCA ERAMNIRLEG
GCQVPIGSYA ELEGDTLWLR ALVGAPDGSQ MIRGERRGPA AEAEQMGIEL ADELLSRGAR
EILAAVYLDN PAR
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