| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_4009 |
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| Symbol | xerC |
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| ID | 6088474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 4421735 |
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| End bp | 4422646 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641599103 |
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| Product | site-specific tyrosine recombinase XerC |
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| Protein accession | YP_001722725 |
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| Protein GI | 170026220 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4973] Site-specific recombinase XerC |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAGT TCAGTGCTTC ACTGGCTCCG CAGGTAGAGG CTTTTCTCCG TTATCTCAGT
ATTGAGCGTC AACTTAGTCC ACTGACCGTC ACCAGTTATC GCCGTCAGTT GTCTGCGCTA
ATGGAAATAG GCGAACAGAT GGGCTTGGCT CACTGGCAGA CGCTGGATGC TGCTCAGGTC
CGTTCGTTGG TCTCCCGCAG CAAACGTGCG GGTTTACATG CTTCAAGCCT GGCATTACGG
CTCTCCGCAT TACGCAGTTT TCTCAACTGG TTGGTCAGCC AGGGCGTGCT GCCAGCCAAC
CCCGCTAAAG GGGTCAGTAC GCCACGCTCG GGCCGCCACC TGCCAAAAAA TATTGATGTT
GATGAAGTCA ATAAACTGCT GAGTATTGAT CTGAATGATC CGCTGGCGGT ACGTGACCGG
GCCATGCTGG AGGTGATGTA CGGCGCGGGG CTGCGTTTAT CTGAATTGGT TGGCATGAAC
TGTAAACATG TGGATCTGGC GAGCGGCGAT GTCTGGGTGA TGGGGAAGGG CAGTAAAGAG
CGCAAGGTGC CGTTAGGTAA AACGGCGGTG ACCTGGTTAC AGCATTGGCT GGCGTTACGT
GAGTTATTCG AACCGCAAGA TGACGCTATT TTTCTGGCCA ATACCGGCAA GCGTATTTCA
GCCCGTAATG TGCAGAAGCG CTTTGCCGAA TGGGGGGTGA AGCAGGGGGT CAGTAGCCAC
ATTCACCCAC ATAAATTACG TCACTCTTTT GCCACGCACA TGCTGGAATC CAGTGGTGAT
CTACGCGCAG TACAAGAGCT ACTGGGCCAT GCCAACCTGA CCACCACGCA AATTTATACA
CATCTCGACT TTCAACATCT GGCGACAGTG TATGATGCTG CTCATCCACG GGCCAAACGA
GGCAAATCCT GA
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| Protein sequence | MTEFSASLAP QVEAFLRYLS IERQLSPLTV TSYRRQLSAL MEIGEQMGLA HWQTLDAAQV
RSLVSRSKRA GLHASSLALR LSALRSFLNW LVSQGVLPAN PAKGVSTPRS GRHLPKNIDV
DEVNKLLSID LNDPLAVRDR AMLEVMYGAG LRLSELVGMN CKHVDLASGD VWVMGKGSKE
RKVPLGKTAV TWLQHWLALR ELFEPQDDAI FLANTGKRIS ARNVQKRFAE WGVKQGVSSH
IHPHKLRHSF ATHMLESSGD LRAVQELLGH ANLTTTQIYT HLDFQHLATV YDAAHPRAKR
GKS
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