Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3997 |
Symbol | |
ID | 6088561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 4408561 |
End bp | 4409181 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641599091 |
Product | threonine efflux system |
Protein accession | YP_001722713 |
Protein GI | 170026208 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGATGC TATTTCTCAC CGTTGCGTTT ATTCATCTGG TTGCTCTGAT TAGTCCAGGG CCTGACTTCT TTTTTGTATC GCAAACTGCC GCCAGCCGCT CACGTGGTGA GGCGATGATG GGCGTGCTGG GGATCTCGCT AGGAATTGTT ATTTGGGCTG GGGTAGCACT GATGGGGTTG AATCTCATCT TGCAGAAAAT GGCTTGGCTG CATCAAATTA TTATGGTCGG CGGTGGGATG TATCTGTGTT GGATGGGGTG GCAGCTATTG AAATCGGCCC GTGCTAAACA TGATGTCGCC GAAGAAGAGG TACAGGTCGT CTTGCCTGCC CGTGGCCGCA CGTTTATCCG TGGTCTGCTG ACCAACCTGT CGAACCCAAA AGCCGTTATC TATTTCGGTA GTGTATTCTC ATGGTTTGTC GGTGATGACA TGGGTGCAGG TGCGCGCTGG GGGTTGTTTA TCCTGATTGT TGGCGAAACC TTCTTATGGT TCACCGTGGT GGCCTGCGTA TTTGCGTTAC CTACCATGCG CCGTGGTTAT CAGCGGCTTT CCAAGTGGAT TGATGGGCTG GCAGGTGTGT TATTTGCCGG TTTTGGTATC CAACTGATAT TGTCCCGCTA A
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Protein sequence | MLMLFLTVAF IHLVALISPG PDFFFVSQTA ASRSRGEAMM GVLGISLGIV IWAGVALMGL NLILQKMAWL HQIIMVGGGM YLCWMGWQLL KSARAKHDVA EEEVQVVLPA RGRTFIRGLL TNLSNPKAVI YFGSVFSWFV GDDMGAGARW GLFILIVGET FLWFTVVACV FALPTMRRGY QRLSKWIDGL AGVLFAGFGI QLILSR
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