| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3936 |
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| Symbol | |
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| ID | 6089715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 4342700 |
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| End bp | 4344220 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641599030 |
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| Product | 3-octaprenyl-4-hydroxybenzoate decarboxylase |
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| Protein accession | YP_001722652 |
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| Protein GI | 170026147 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCATC CCATAGCCGC CGAAATGATC AGCATGAAAT ACCGTGACTT ACGTGACTTC
CTCTCATTAC TGGAACAGAG GGGGGAACTT AAACGCATTA GCCAGCCCAT TGATCCTTAT
TTGGAAATGA CAGAAATTGC CGATCGCACG TTACGTGCTG GTGGGCCTGC GTTACTTTTT
GAGAACCCTA AAGGTTACAG CATGCCCGTG TTGTGTAATC TGTTTGGCAC CGCTAAGCGA
GTCGCCATGG GGATGGGGCA AGAAGATGTC AGCGCCCTGC GAGATGTTGG TAAATTATTG
GCCTTCCTGA AAGAACCCGA TCCCCCAAAA GGTTTCCGTG ACTTATTTGA TAAGCTGCCA
AAATTTAAGC AGGTATTGAA TATGCCAACG AAACGCTTGA ACTCGGCCCC GTGTCAGGAG
CAAGTTTGGC AAGGTGAGGA TGTTGATTTA AGTCGCATCC CTGTGATGCA CTGCTGGCCA
GAAGATGCCG CACCACTAGT CTCTTGGGGG TTGACTATTA CACGTGGTCC CCACAAAGAA
CGGCAGAATC TAGGCATCTA TCGCCAGCAG GTATTGGGTA AAAACAAATT AATTATGCGT
TGGCTATCGC ATCGTGGTGG TGCGCTGGAT TATCAGGAGT GGTGTGAGGC ACACCCTGGT
GAACGTTTTC CGGTCGCTGT CGCCTTGGGA GCAGACCCTG CTACGATCTT AGCCGCAGTG
ACCCCGGTAC CAGACACGCT GTCTGAATAT GCCTTTGCCG GCTTGTTACG CGGCCATAAA
ACGGAAGTGG TGAAGTGTCT TTCCAATGAC CTTGAAGTTC CTGCAAGTGC AGAAATTGTA
TTGGAAGGAT ATATCGAACA AGGTGATATG GCTCCGGAAG GTCCTTATGG TGATCATACG
GGCTATTACA ATGAAATAGA TAATTTCCCC GTGTTTACCG TCACGCATAT TACACAGCGC
CAAGACGCAA TTTATCATTC AACCTATACG GGCCGACCAC CGGATGAACC TGCGGTAATG
GGGGTGGCAC TGAACGAAGT CTTTGTACCT ATTTTGCAAA AGCAATTCCC GGAAATTGTT
GATTTCTACT TGCCACCAGA AGGGTGCTCA TACCGGTTGG CGGTGGTAAC CATCAAGAAA
CAATATGCAG GCCATGCCAA ACGCGTGATG ATGGGAGTAT GGTCGTTTTT ACGCCAGTTT
ATGTATACCA AGTTTGTTAT TGTTTGTGAT GACGATATTA ATGCTCGTGA TTGGAATGAT
GTAATTTGGG CGATCACCAC CCGGATGGAC CCATCCCGCG ATACGGTGTT AATTGAAAAT
ACACCGATAG ATTATTTGGA TTTCGCCTCA CCGGTTTCCG GTTTGGGATC GAAAATGGGG
CTGGATGCCA CCAACAAATG GCCAGCAGAG ACTCCGCGTG AATGGGGGCG TCCAATTAAG
ATGGACGAAG ACGTCCGTGC CCGTATTGAT GCTCTGTGGG ATGAGCTGGC CATTTTCAGT
GACAAAGACG CGAAACGCTA A
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| Protein sequence | MAHPIAAEMI SMKYRDLRDF LSLLEQRGEL KRISQPIDPY LEMTEIADRT LRAGGPALLF
ENPKGYSMPV LCNLFGTAKR VAMGMGQEDV SALRDVGKLL AFLKEPDPPK GFRDLFDKLP
KFKQVLNMPT KRLNSAPCQE QVWQGEDVDL SRIPVMHCWP EDAAPLVSWG LTITRGPHKE
RQNLGIYRQQ VLGKNKLIMR WLSHRGGALD YQEWCEAHPG ERFPVAVALG ADPATILAAV
TPVPDTLSEY AFAGLLRGHK TEVVKCLSND LEVPASAEIV LEGYIEQGDM APEGPYGDHT
GYYNEIDNFP VFTVTHITQR QDAIYHSTYT GRPPDEPAVM GVALNEVFVP ILQKQFPEIV
DFYLPPEGCS YRLAVVTIKK QYAGHAKRVM MGVWSFLRQF MYTKFVIVCD DDINARDWND
VIWAITTRMD PSRDTVLIEN TPIDYLDFAS PVSGLGSKMG LDATNKWPAE TPREWGRPIK
MDEDVRARID ALWDELAIFS DKDAKR
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