Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3934 |
Symbol | fadA |
ID | 6088585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 4340621 |
End bp | 4341784 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641599028 |
Product | 3-ketoacyl-CoA thiolase |
Protein accession | YP_001722650 |
Protein GI | 170026145 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases [TIGR02445] fatty oxidation complex, beta subunit FadA |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAATG TAGTCATTAT TGATGCCGTG CGTACACCGA TGGGCCGCTC CAAAGGGGGG GCTTTTCGTC ATGTACGGGC TGAAGACCTC TCTGCCCATT TAATGCGTGC CGTTATCAGC CGTAATCCTG GGTTGAATGC TGCTGAAATC GACGATATTT ATTGGGGTTG TGTGCAACAA ACGTTGGAGC AGGGTTTCAA TATTGCCCGT AACGCGTCTT TATTAGCCGA AATTCCTCAC AGCGTACCCG CTGTTACCGT TAATCGCCTG TGTGGCTCAT CAATGCAAGC TCTGCATGAT GGCGCACGAG CCATTATGGT GGGTGATGCG AAGATCAGTT TGATTGGTGG AGTGGAACAT ATGGGCCACG TGCCAATGAA CCACGGCGTG GATTTCCATC CAGGAATGGG TCGCACTGTT GCCAAAGCGG CTGGAATGAT GGGCTTGACC GCTGAGATGT TGGCTAAAAT TCACAATATC AGCCGCCAGT CACAAGATGA GTTTGCATTC CGTTCTCATC AACGTGCTTA TGCTGCGACT CAGGCAGGGC ATTTCGCAAA AGAAATCGTT GCAACCAATG GGCATGATGC AGAAGGTGTA TTAAAACGCT TTGATTTCGA TGAAGTCATT CGTCCTGAAA CAAATCTATC CGGTCTAGCA GCCTTGCGCC CTGCATTTGA TCCGGTAAAT GGCACAGTTA CTGCAGGGAC ATCATCAGCC TTGTCCGATG GGGCTTCTGC GATGCTGATT ATGAGCGAAT CCAGAGCGAA GTCATTAGGT TTAACCCCAC GAGCACGTAT CCGTTCGATG GCGGTCGTAG GTTGTGACCC CTCAATCATG GGCTATGGCC CGGTACCTGC TAGTCAATTG GCATTAAAAC GTGCTGGCCT TGAATTGGCA GATATTGGTT TATTTGAGTT AAACGAGGCG TTTGCTGCTC AGTCACTGGC TTGTCTGAAA GGTTTAGGCT TGTTAGAAAG CATGGACGAT AAAGTAAACC TGAACGGTGG AGCCATTGCA TTAGGTCACC CGTTAGGCTG TTCAGGCGCA CGGATCTCTA CCACATTGTT AAACCTGATG GAGCGCCGTG ACGTACAATT TGGGCTAGCA ACCATGTGTA TCGGCCTAGG GCAAGGTATT GCTACCGTAT TTGAGCGCTT ATAG
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Protein sequence | MENVVIIDAV RTPMGRSKGG AFRHVRAEDL SAHLMRAVIS RNPGLNAAEI DDIYWGCVQQ TLEQGFNIAR NASLLAEIPH SVPAVTVNRL CGSSMQALHD GARAIMVGDA KISLIGGVEH MGHVPMNHGV DFHPGMGRTV AKAAGMMGLT AEMLAKIHNI SRQSQDEFAF RSHQRAYAAT QAGHFAKEIV ATNGHDAEGV LKRFDFDEVI RPETNLSGLA ALRPAFDPVN GTVTAGTSSA LSDGASAMLI MSESRAKSLG LTPRARIRSM AVVGCDPSIM GYGPVPASQL ALKRAGLELA DIGLFELNEA FAAQSLACLK GLGLLESMDD KVNLNGGAIA LGHPLGCSGA RISTTLLNLM ERRDVQFGLA TMCIGLGQGI ATVFERL
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