Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3923 |
Symbol | actP |
ID | 6089934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 4323579 |
End bp | 4325234 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641599015 |
Product | acetate permease |
Protein accession | YP_001722641 |
Protein GI | 170026136 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR02711] cation/acetate symporter ActP |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.281224 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATCC GCCATTGGTC TGCACTTTCT TTATTCGTTT TGCCTGCGCT AGCACAGGCG GAAGCACTTA CCGGCGAGGT CCACCGCCAA CCCCTCAATA TTCAGGCGAT CGTCATGTTT TTGCTGTTTG TTGGCGGAAC CTTGTATATC ACCTATTGGG CATCAAAACG TACTCGCTCC CGGCAAGATT ATTACACGGC TGGCGGGCGA ATTACTGGCT TTCAAAATGG TTTAGCCATC GCTGGGGATT ATATGTCCGC AGCATCATTC CTCGGTATTT CAGCCTTGGT TTATGCTTCC GGTTACGACG GTTTAATTTA CTCCATCGGC TTCTTAATCG GCTGGCCCAT TATTCTATTT TTAATTGCTG AACGCCTGCG TAATTTGGGG CGTTATACCT TTGCCGATGT TGCCTCTTAC CGCTTGCAAC AAAGACCCAT ACGCACATTA TCAGCCTGTG GTTCGTTAGT CGTTGTCGCC CTGTATTTGA TCGCTCAGAT GGTGGGGGCA GGTAAACTCA TTCAACTTTT ATTTGGTTTG AACTACCACG TCGCTGTCGT GTTGGTTGGT ATCCTGATGG TGCTGTACGT CCTGTTCGGC GGTATGTTAG CAACCACTTG GGTACAGATA ATCAAAGCGG TCATGCTACT GTCTGGTGCC ACATTTATGG CTATTATGGT CATGAAATCA GTTAATTTTA ACTTCAATAC GTTATTCAGT GAGGCGGTTA AAGTTCATCC CAAAGGCCTT AGCATCATGA GCCCAGGAGG GTTGGTATCT GACCCGATAT CAGCATTATC TCTTGGTTTG GCCCTCATGT TTGGCACTGC TGGCTTACCT CATATCCTGA TGCGCTTCTT TACCGTAAGC GATGCCAAAG AAGCACGTAA AAGCGTGTTC TATGCCACAG GTTTTATAGG CTACTTCTAC ATATTGACCT TTATTATTGG ATTCGGCGCG ATCTTACTCG TCGGTCCAAA CCAGACATTT AAAGATGCGG CTGGCGCATT ACTGGGTGGT AACAATATGG CTGCGGTCCA TTTGGCTAAT GCTGTCGGGG GGAGCTTCTT CTTAGGCTTT ATCTCAGCGG TTGCCTTCGC AACCATTTTG GCTGTAGTGG CTGGCTTGAC ATTAGCCGGT GCATCGGCGG TATCTCATGA TCTCTATGCC AGCGTCATTA AGAAAGGCAA AGCCAATGAA CGCGATGAAT TGAGAGTCTC CAAAATTACG GTAATCATCT TAGGTATCGT CGCTATTGGT TTGGGGATTT TGTTTGAAAA ACAGAATATT GCCTTTATGG TCGGGTTGGC ATTCTCCATT GCGGCCAGTT GTAACTTCCC AATTATTATC ATCTCAATGT ATTGGGATAA ACTGACAACC CGTGGAGCAA TGATCGGTGG GTGGCTCGGG TTATCAACGG CAGTGATCCT GATGATTTTA GGCCCTACGA TCTGGGTAAC AATCCTTGGT CATGAAAAGC CAATCTATCC GTATGAGTAC CCTGCATTGT TTTCAATGAT AGCGGCGTTC GTCGGTACCT GGTTCTTCTC AATCACTGAT AACTCAGAAA CCGGCAAACA GGAACGGTTA CTATTCAAAT CACAGTTTGT CCGTTCACAA ACCGGCTTGG GGGCATCTAA AGGCGGCGCT CACTGA
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Protein sequence | MKIRHWSALS LFVLPALAQA EALTGEVHRQ PLNIQAIVMF LLFVGGTLYI TYWASKRTRS RQDYYTAGGR ITGFQNGLAI AGDYMSAASF LGISALVYAS GYDGLIYSIG FLIGWPIILF LIAERLRNLG RYTFADVASY RLQQRPIRTL SACGSLVVVA LYLIAQMVGA GKLIQLLFGL NYHVAVVLVG ILMVLYVLFG GMLATTWVQI IKAVMLLSGA TFMAIMVMKS VNFNFNTLFS EAVKVHPKGL SIMSPGGLVS DPISALSLGL ALMFGTAGLP HILMRFFTVS DAKEARKSVF YATGFIGYFY ILTFIIGFGA ILLVGPNQTF KDAAGALLGG NNMAAVHLAN AVGGSFFLGF ISAVAFATIL AVVAGLTLAG ASAVSHDLYA SVIKKGKANE RDELRVSKIT VIILGIVAIG LGILFEKQNI AFMVGLAFSI AASCNFPIII ISMYWDKLTT RGAMIGGWLG LSTAVILMIL GPTIWVTILG HEKPIYPYEY PALFSMIAAF VGTWFFSITD NSETGKQERL LFKSQFVRSQ TGLGASKGGA H
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