Gene YPK_3920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3920 
SymbolgltP 
ID6090039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4319085 
End bp4320401 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content44% 
IMG OID641599012 
Productglutamate/aspartate:proton symporter 
Protein accessionYP_001722638 
Protein GI170026133 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGTA TAAAAATAAG TCTGGCATGG CAAATACTCA TTGCACTGGT GTTAGGCATT 
TTGGTTGGCG CAGTTTTACA TAATCAAATT GAATCCAGGG AATTGTTAGT TAGTAATATT
CTGAGTCCAG CGGGCGATAT ATTTATCCGC TTAATTAAAA TGATTGTTGT ACCGATTGTT
ATTTCAACGT TAATTGTCGG TATTGCGGGG GTCGGTGATG CGAAGAAACT TGGCCGGATT
GGCCTAAAAA CCATTATCTA CTTTGAAGTT ATCACCACGA TTGCCATTAT TATCGGTATC
ACTCTGGCGA ATGTATTCCA GCCGGGGGTG GGTATAGATA TGTCTGCGCT AACCGTCGTT
GATATCTCTC AGTATGAAAA AACCACTGAA CAGGTGCAAA GCGGTAGTCA TAGTCTGGTT
AGCACTATCT TGTCGCTGAT CCCGGCCAAT GTCTTTGCCT CAATGGCGAA AGGCGATATG
TTGCCGATTA TTTTCTTCTC AGTGTTGTTT GGTTTAGGGC TGTCTTCATT GCCAAAAGAA
ACCAAAGAAC CACTGTTGAA TGTGTTCAAG GCTGTTTCTG AAAGCATGTT CAAAGTCACT
CACATGATTA TGCGTTATGC GCCTATCGGG GTGTTTGGCT TGATCTCGGT GACTGTGGCT
AACTTTGGTT TTGCCTCACT AATCCCTCTC GCGAAGTTAG TTATTCTGGT TTATGCCGCG
ATCCTGTTCT TTGCTTTGGT TATTCTGGGA ACGGTAGCGA GATTATGTAA GCTGCGGATC
TGGATATTGA TTCGTATTTT GAAAGATGAA CTGATTTTGG CGTATTCCAC TGCCAGTTCT
GAGACAGTCT TACCGCGTAT TATTGAGAAA ATGGAAGCTT ATGGCGCACC AAAAGCGATT
ACCAGCTTTG TGGTTCCAAC GGGTTATTCA TTCAACTTAG ATGGCTCGAC ATTATATCAG
AGCATTGCGG CTATCTTCAT TGCACAGTTA TACGGAATCG AATTGTCTAT TGGGCAAGAG
ATTATTTTGG TTCTGACATT GATGGTGACC TCGAAAGGGA TTGCTGGTGT ACCAGGCGTC
TCCTTCGTCG TATTACTGGC AACGTTGGGC AGTGTGGGTA TTCCATTGGA AGGCCTGGCC
TTCATTGCCG GTGTTGACCG TATTCTGGAT ATGGCCCGTA CCGCGTTGAA TGTGGTGGGT
AATGCATTGG CAGTATTGGT GATCGCCAAA TGGGAAAATC AGTTTGACGA TAAAAAAGCC
AAGGCTTATG AAAAAGCGTT GTTTGCAGCA GAGCAGACGC CAGCTAATCA AAGCTAA
 
Protein sequence
MKSIKISLAW QILIALVLGI LVGAVLHNQI ESRELLVSNI LSPAGDIFIR LIKMIVVPIV 
ISTLIVGIAG VGDAKKLGRI GLKTIIYFEV ITTIAIIIGI TLANVFQPGV GIDMSALTVV
DISQYEKTTE QVQSGSHSLV STILSLIPAN VFASMAKGDM LPIIFFSVLF GLGLSSLPKE
TKEPLLNVFK AVSESMFKVT HMIMRYAPIG VFGLISVTVA NFGFASLIPL AKLVILVYAA
ILFFALVILG TVARLCKLRI WILIRILKDE LILAYSTASS ETVLPRIIEK MEAYGAPKAI
TSFVVPTGYS FNLDGSTLYQ SIAAIFIAQL YGIELSIGQE IILVLTLMVT SKGIAGVPGV
SFVVLLATLG SVGIPLEGLA FIAGVDRILD MARTALNVVG NALAVLVIAK WENQFDDKKA
KAYEKALFAA EQTPANQS