| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3671 |
|---|
| Symbol | |
|---|
| ID | 6090252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 4051420 |
|---|
| End bp | 4052241 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641598758 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001722391 |
|---|
| Protein GI | 170025886 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG4268] McrBC 5-methylcytosine restriction system component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACTTA AACTAATGCT TTCCGCGCAG TTGCGGCATA ACGTGGTGAG TCGTCATAAG
TTTTGTGTCG ATTATGATGA CTATATGTCT GATTGCGCAG CCAATCGGCT CTTACACTCA
GCGCTGGATA AGCTACTTAG CCTGAAGCTT TCATCTGAGA ATCAACGCTG GCTTTATGAG
CTGCGTTTTG CGTTTGACGG TATTCCACTT AGTCGGGATA TTGAAAGAGA TATAAGCAGC
TTACGCCTGG AGCGTGGTAT GGCTCATTAC ACCGAGCCAA TGGCTTGGGC GCAGTTGATT
CTGAGGGGAA TGAGCCCGAG TGCCTTGCAA GGAAACGCCA AAGCCATGTC TCTCTTGTTC
CCTATGGAAG CGGTATTTGA GTCCTTTGTT GCTCAAACTC TTCCCGACGA ATTGCCCTCT
CACTTCAAAG TTAAATCGCA GGCTGCCACT TATTCCTTGG TGAAACATGG GGCTTACGAC
TGCTTTAAGC TTCGCCCCGA TCTGTTGGTT CAATCACGCC AGCCGGTTCA AACCAAAATG
GTGATGGATA CAAAATGGAA GCTGGTGAAT AACAGCCAGC AAAAAAAATC ACTGTATGGA
CTAGCACAAT CTGACTTCTA TCAAATGTTT GCCTATGGCC AAAAATACCT TAGTGGAACA
GGCGAGATGT ATCTGATTTA CCCCGCGCAT GATGACTTTA ACCAACCGAT ACCGCAGCAC
TTTGCTTTTT CAGAAACCCT AAAATTATGG GTTGTGCCAT ACCAGATAAC AGCAAAGCCC
GGTGAGAGGA TGATGTGGGC GGGGGATGTG TCCAATATAT AG
|
|---|
| Protein sequence | MTLKLMLSAQ LRHNVVSRHK FCVDYDDYMS DCAANRLLHS ALDKLLSLKL SSENQRWLYE
LRFAFDGIPL SRDIERDISS LRLERGMAHY TEPMAWAQLI LRGMSPSALQ GNAKAMSLLF
PMEAVFESFV AQTLPDELPS HFKVKSQAAT YSLVKHGAYD CFKLRPDLLV QSRQPVQTKM
VMDTKWKLVN NSQQKKSLYG LAQSDFYQMF AYGQKYLSGT GEMYLIYPAH DDFNQPIPQH
FAFSETLKLW VVPYQITAKP GERMMWAGDV SNI
|
|---|
| |