| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3668 |
|---|
| Symbol | |
|---|
| ID | 6088865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 4049912 |
|---|
| End bp | 4050721 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641598755 |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_001722388 |
|---|
| Protein GI | 170025883 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4643] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTGATCG CCGAGGGTTA CGCAACCGGC GTTACCGTTT CGTTACTGGG TAATGGGGTA
GTACTGGCCG CACTGGACGA AGGCAACCTA ATTCACGTCG CGAAGGTCTG CCGGGCAAAG
TGGCCACTGG CAAAAATCAT CATTGCCGCA GATAACGACT GGCACGAACC GGGCGAATGT
GACGAAAAAG GCAAACCCAA GCAGAATATT GGCGTTATCT CCGCTGAAAA AGCCGCCATT
TCCGTTTCTG GCTGGGTAGC GGTAGAATTG ACTTTATTGG TCTTTATCCG TTCCAGTGAA
TTACGCTTTG CCCGTTGGTC AGAAGTTGAT TTTGAAACCG CCATGTGGAC CATCCCTGGA
GAACGTGAGC CATTGGAAGG TGTGAAGCAT TCACATCGAG GTTCAAAAAT GCGCACTCCC
CATCTTGTCC CCTTATCCCG CCAGGCTCTC GCCATTCTGG AAAAGATCAA AAGCATGAGT
GGAAACCGTG AACTGATCTT TATCGGTGAT CATGACCCAC GTAAGCCAAT GAGTGAGAAC
ACGGTGAATA AAGCACTTCG AGTGATGGGC TACGATACGA AAGTTGAAGT TTGTGGTCAT
GGTTTTAGAA CAATGGCTTG TAGTTCGTTG ATTGAATCGG GATTATGGTC GAGAGATGCG
GTTGAGCGGC AGATGAGTCA CCAGGAACGT AACTCTGTGC GTGCGGCTTA TATTCATAAG
GCCGAGCACT TAGATGAACG CAGATTGATG ATTCAGTGGT GGGCGGATTT TTTTGGAGGC
AAACAGGCAG CAAGCTATTT CACCTTTTGA
|
|---|
| Protein sequence | MLIAEGYATG VTVSLLGNGV VLAALDEGNL IHVAKVCRAK WPLAKIIIAA DNDWHEPGEC
DEKGKPKQNI GVISAEKAAI SVSGWVAVEL TLLVFIRSSE LRFARWSEVD FETAMWTIPG
EREPLEGVKH SHRGSKMRTP HLVPLSRQAL AILEKIKSMS GNRELIFIGD HDPRKPMSEN
TVNKALRVMG YDTKVEVCGH GFRTMACSSL IESGLWSRDA VERQMSHQER NSVRAAYIHK
AEHLDERRLM IQWWADFFGG KQAASYFTF
|
|---|
| |