Gene YPK_3655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3655 
Symbol 
ID6089551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4035766 
End bp4036056 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content45% 
IMG OID641598742 
Productautoinducer-2 (AI-2) modifying protein LsrG 
Protein accessionYP_001722375 
Protein GI170025870 
COG category[S] Function unknown 
COG ID[COG1359] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGTTA CTCTCGTCGA AATTAATGTA AAAGAGGACA AAGTTGATCA GTTCATTGAG 
GTTTTTCGCG CCAATCACCT TGGGTCTATC CGCGAAGCGG GGAATTTACG TTTTGATGTG
TTAAGGGACG AGCATATCCC GACGCGCTTT TATATTTACG AAGCCTATAC CGATGAAGCT
GCGGTCGCCA TTCATAAGAC AACACCGCAT TACTTACAGT GTGTCGAACA GTTGGCACCA
TTAATGACGG GGCCACGCAA AAAAACGGTA TTTATCGGCC TAATGCCTTA G
 
Protein sequence
MHVTLVEINV KEDKVDQFIE VFRANHLGSI REAGNLRFDV LRDEHIPTRF YIYEAYTDEA 
AVAIHKTTPH YLQCVEQLAP LMTGPRKKTV FIGLMP