Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3633 |
Symbol | prfC |
ID | 6090408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 4009410 |
End bp | 4010999 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641598717 |
Product | peptide chain release factor 3 |
Protein accession | YP_001722353 |
Protein GI | 170025848 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG4108] Peptide chain release factor RF-3 |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCCTA GTGAATATGC TCTGGAAGTC GCGAAAAGAC GTACTTTTGC GATCATTTCC CACCCCGATG CCGGTAAAAC AACCATTACC GAAAAAGTGT TGCTGTTCGG ACATGCAATT CAGACTGCCG GGACAGTAAA AGGCCGTGGT TCAAGCCATC ATGCCAAATC TGACTGGATG GAAATGGAAA AACAACGCGG TATCTCCATT ACCACGTCGG TAATGCAGTT TCCGTATGGC GGCTGTCTGG TCAATCTGCT TGATACCCCA GGGCATGAAG ACTTCTCCGA AGATACGTAC CGCACACTGA CGGCGGTTGA CTGCTGTTTG ATGGTGATCG ATGCGGCCAA AGGGGTAGAA GACCGGACCC GCAAATTGAT GGAAGTGACC CGTCTGCGCG ATACGCCAAT TCTGACCTTT ATGAACAAAT TGGACCGCGA AATTCGTGAT CCAATGGAAG TTCTGGATGA AGTCGAGCGT GAGCTGAACA TTGCCTGTTC ACCTATCACT TGGCCGATTG GTTGCGGTAA GTCGTTTAAA GGGGTTTATC ACCTTCATAA AGACGAAACT TATCTGTATC AAAGCGGTAA AGGCCATACC ATTCAGGAAG TCCGTATCGT TAAAGGGCTG AACAACCCAG ATCTGGATGT GGCTGTTGGC GAAGACTTGG CCAAGCAGTT CCGTCAGGAG TTGGAACTGG TTCAGGGCGC TTCCCACGAG TTTGATCATG AGGCTTTCCT GTCCGGTGAT TTAACGCCCG TCTTCTTCGG TACTGCGTTG GGTAACTTCG GTGTGGACCA TATGTTAGAT GGCTTGGTCG AATGGGCACC GGCACCGATG CCGCGTAAAA CGGATACCCG CGTAGTGGTC GCCTCTGAAG AGAAATTCAC CGGTTTCGTT TTCAAAATTC AGGCCAATAT GGATCCGAAA CACCGTGACC GTGTGGCCTT TATGCGCGTG GTGTCTGGCC GTTTTGAGAA AGGAATGAAG CTGCGTCAGG TACGGACCAA GAAAGACGTG GTGATTTCAG ACGCGCTGAC CTTTATGGCC GGTGACCGTT CTCACGTTGA AGAGGCCTAT GCTGGTGATA TTATCGGCTT GCATAACCAT GGCACCATCC AGATCGGTGA CACCTTCACT CAAGGTGAAG ATATGAAATT CACCGGTATT CCTAACTTTG CCCCTGAATT GTTCCGCCGC ATTCGCCTGC GCGATCCATT AAAGCAGAAG CAGTTGTTAA AAGGCTTGGT TCAGTTGTCA GAAGAGGGAG CCGTTCAGGT ATTCCGCCCA CTGAGCAACA ACGATTTGAT CGTGGGCGCT GTGGGGGTGC TGCAGTTTGA AGTGGTCTCT TCCCGCTTGA AGAGTGAATA CAACGTCGAA GCGGTGTATG AATCAGTTAA CGTTTCTACC GCGCGTTGGG TCGAATGTAA TGACGTGAAG AAATTTGAGG AGTTCAAACG TAAGAATGAG CTTAATTTGG CCTTAGACGG TGGTGATAAT TTAAGTTACA TCGCGCCCAC GATGGTTAAT CTCAATATTA CACAAGAGCG TTACCCGGAC GTTATTTTCC GCAAAACACG CGAGCACTAA
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Protein sequence | MSPSEYALEV AKRRTFAIIS HPDAGKTTIT EKVLLFGHAI QTAGTVKGRG SSHHAKSDWM EMEKQRGISI TTSVMQFPYG GCLVNLLDTP GHEDFSEDTY RTLTAVDCCL MVIDAAKGVE DRTRKLMEVT RLRDTPILTF MNKLDREIRD PMEVLDEVER ELNIACSPIT WPIGCGKSFK GVYHLHKDET YLYQSGKGHT IQEVRIVKGL NNPDLDVAVG EDLAKQFRQE LELVQGASHE FDHEAFLSGD LTPVFFGTAL GNFGVDHMLD GLVEWAPAPM PRKTDTRVVV ASEEKFTGFV FKIQANMDPK HRDRVAFMRV VSGRFEKGMK LRQVRTKKDV VISDALTFMA GDRSHVEEAY AGDIIGLHNH GTIQIGDTFT QGEDMKFTGI PNFAPELFRR IRLRDPLKQK QLLKGLVQLS EEGAVQVFRP LSNNDLIVGA VGVLQFEVVS SRLKSEYNVE AVYESVNVST ARWVECNDVK KFEEFKRKNE LNLALDGGDN LSYIAPTMVN LNITQERYPD VIFRKTREH
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