| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3593 |
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| Symbol | |
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| ID | 6088752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3960193 |
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| End bp | 3961332 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641598677 |
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| Product | chaperone protein DnaJ |
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| Protein accession | YP_001722313 |
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| Protein GI | 170025808 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00197721 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGAAGA GAGATTATTA CGAGGTTTTA GGCGTCAGCA GGGACGCCGA AGAGCGTGAA
ATCAAAAAAG CCTATAAACG CCTGGCAATG AAATTCCATC CGGATCGTCA ATCGGAGGAT
AAAAACGCCG AAGAGAAGTT TAAAGAAGCC AAAGAAGCCT ATGAAATTCT GACCGACGCA
CAAAAGCGTG CGGCATATGA TCAATACGGC CATGCAGCCT TTGAACAAGG TGGAATGGGA
GGCGGCGGTT TCGGTGGCGG CGGCGGTGGT GCTGATTTTT CCGATATCTT CGGTGATGTT
TTTGGTGACA TTTTTGGTGG TGGCCGGCGT CAGCAGCGTG CATCCCGTGG TTCAGATCTA
CGTTACAACA TGGATCTGAC ACTGGAAGAA GCTGTGCGTG GTGTAACCAA AGAGATCCGA
ATCCCAACGC TGGATGAATG TGATGTTTGC CACGGTAGCG GTGCTAAACC GGGGAGTTCA
CCAGTCACTT GCCCAACTTG CCATGGGGCA GGTCAGGTAC AGATGCGCCA GGGGTTCTTT
ACCGTACAAC AGGCATGTCC TCATTGTCAT GGACGTGGTC AAATCATTAA AGACCCATGC
AACAAGTGTC ATGGACATGG TCGTGTTGAG AAATCGAAAA CGCTGTCGGT CAAAATTCCG
GCGGGTGTTG ATACCGGTGA TCGCATTCGC TTAAGTGGTG AAGGCGAGGC GGGTGAGCAT
GGTGCACCGT CAGGTGATTT GTACGTTCAG GTACAAGTCA AGGCGCATCC AATCTTCGAG
CGCGAAGGCA ACAATCTGTA TTGTGAGGTT CCTATTAACT TTGCAATGGC GGCATTGGGC
GGCGAAATCG AAGTCCCTAC ATTGGATGGG CGGGTTAAGT TAAAAATCCC TGCTGAAACC
CAAACAGGTA AAATGTTCCG CATGCGTGGC AAAGGCGTTA AGTCTGTTCG TGGTGGTAGC
CAAGGCGATT TGTTATGCCG TGTTGTGGTT GAAACGCCGG TTAGCCTGAG CGAAAAACAA
AAACAACTGC TGCGTGAGCT GGAAGAGAGC TTTGTCGGTG CTGCTGGTGA AAAAAATAGC
CCGCGAGCTA AAAGTTTCTT AGATGGCGTT AAAAAATTCT TTGACGACCT GACACGCTAA
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| Protein sequence | MAKRDYYEVL GVSRDAEERE IKKAYKRLAM KFHPDRQSED KNAEEKFKEA KEAYEILTDA
QKRAAYDQYG HAAFEQGGMG GGGFGGGGGG ADFSDIFGDV FGDIFGGGRR QQRASRGSDL
RYNMDLTLEE AVRGVTKEIR IPTLDECDVC HGSGAKPGSS PVTCPTCHGA GQVQMRQGFF
TVQQACPHCH GRGQIIKDPC NKCHGHGRVE KSKTLSVKIP AGVDTGDRIR LSGEGEAGEH
GAPSGDLYVQ VQVKAHPIFE REGNNLYCEV PINFAMAALG GEIEVPTLDG RVKLKIPAET
QTGKMFRMRG KGVKSVRGGS QGDLLCRVVV ETPVSLSEKQ KQLLRELEES FVGAAGEKNS
PRAKSFLDGV KKFFDDLTR
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