Gene YPK_3455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3455 
Symbol 
ID6090689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3793578 
End bp3794420 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content54% 
IMG OID641598539 
Productvitamin B12-transporter protein BtuF 
Protein accessionYP_001722175 
Protein GI170025670 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCCAC TGGGTCTTTT TCCTCTGCCA CGCGCAGCAG CAGTGTTGCT AATTAGCCTG 
CTAACACTCC CAGCACAGGC TGCCGAACGG GTTATCAGTT TATCGCCTAG TACCACGGAA
CTGGCTTATG CTGCAGGTTT GGGCGATAAG TTGGTCGCGG TCAGTGCGTA CTCTGATTAC
CCGGAATCGG CTAAAAAGTT AGAACATGTG GCGTCGTGGC AAGGCATTAA CGTTGAGCGT
ATTCTGGCAC TAAAACCCGA TCTGATCCTC GCCTGGCGTG GAGGTAATCC ACAACGGCCG
CTGGATCAAT TAGCGGCGTT GGGTATTCCG ATTTTCTACT CTGACCCCAC GCATATCGAT
CAGATTGCCA GCGATCTGGA TAAGCTAGCG CAATACAGCC CGCACCCCGA GCAGGCACAT
CAGGCCGCTG AACAATTCCG TCAACACGTC AACACACTGC GTGATCGCTA TGCCCGCAGT
CAGCCCAAAC GTACCTTTTT GCAATTCGGT ACTCAGCCAC TGTTTACCAG CTCCGGGCAC
ACCTTACAGA GTGAAGTCGT TTCACTCTGT GGTGGAGAAA ATATTTTTGC CGACAGCCGG
GTTCCCTGGC CACAAGTCAG TCGTGAGCGA GTGATGACAC GTAAGCCACA GGTCATCGTG
GTAAGCGGTA CGCAGTCGCA AGTCGATAAC GTCTCCGCCT TTTGGTTGCC TCAGCTTGTG
GTACCTGTTA TCGCCCTGAA TGAAGACTGG TTTAATCGCG CCAGCCCACG TATCCTGCTG
GCCGCTCAAC AGCTGTGCCA ACAAATGGCC AGCATTCCAA CCCCTGTCGC GGAGTCACAT
TAA
 
Protein sequence
MMPLGLFPLP RAAAVLLISL LTLPAQAAER VISLSPSTTE LAYAAGLGDK LVAVSAYSDY 
PESAKKLEHV ASWQGINVER ILALKPDLIL AWRGGNPQRP LDQLAALGIP IFYSDPTHID
QIASDLDKLA QYSPHPEQAH QAAEQFRQHV NTLRDRYARS QPKRTFLQFG TQPLFTSSGH
TLQSEVVSLC GGENIFADSR VPWPQVSRER VMTRKPQVIV VSGTQSQVDN VSAFWLPQLV
VPVIALNEDW FNRASPRILL AAQQLCQQMA SIPTPVAESH