Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3445 |
Symbol | |
ID | 6091113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 3778490 |
End bp | 3779095 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641598529 |
Product | superoxide dismutase |
Protein accession | YP_001722165 |
Protein GI | 170025660 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2032] Cu/Zn superoxide dismutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAA TTACATTATT GCTACCTGTT ATTCTTTACT CCAGCGCAAC ACTGGCCGCT AACATGGCTG GCATGAATGA TAAGGCTGGC ATGAATGATA AGGCTGGCAT GAATGATAAG GCCAGTATGA ATGATATGGC TAGCATGACT GTGAAAATCA ACGAATCATT GCCACAAGGT AATGGGAAAG CGCTTGGCAC CGTGACGGTG ACTGAAACCG CTTATGGCTT ACTGTTTACG CCACATCTCA CTGGGCTGGC TCCGGGAATT CACGGTTTCC ATCTGCATGA AAAACCCAGT TGTGCTCCGG GGATGAAAGA TGGCAAGGCA GTGCCAGCAT TGGCAGCCGG GGGGCATCTT GACCCAAATA AGACCGGGGT ACACCTTGGT CCTTACAACG ATAAAGGGCA TCTGGGGGAT CTGCCGGGAT TGGTGGTTAA TGCAGATGGC ACCGCCACCT ATCCCGTATT GGCTCCGCGC CTGAAATCGT TGTCAGAGGT GAAACAGCAT GCGTTAATGA TCCATGCTGG CGGTGATAAT TACTCTGATC ATCCAATGCC TTTAGGCGGT GGTGGCGCAC GGATGGCATG TGGAGTCATT GAGTAA
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Protein sequence | MKLITLLLPV ILYSSATLAA NMAGMNDKAG MNDKAGMNDK ASMNDMASMT VKINESLPQG NGKALGTVTV TETAYGLLFT PHLTGLAPGI HGFHLHEKPS CAPGMKDGKA VPALAAGGHL DPNKTGVHLG PYNDKGHLGD LPGLVVNADG TATYPVLAPR LKSLSEVKQH ALMIHAGGDN YSDHPMPLGG GGARMACGVI E
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