Gene YPK_3422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3422 
Symbol 
ID6087121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand+ 
Start bp3755035 
End bp3755490 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content46% 
IMG OID641598506 
Productribose-5-phosphate isomerase B 
Protein accessionYP_001722142 
Protein GI170025637 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01120] ribose 5-phosphate isomerase B 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.208549 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTCTA TTGCAATCGG CTGTGATGAT GCCGCTATTG AGATGAAAAA CCAGATTGTT 
ATTTTTCTAC AAAGTAAGAA CATCACTGTC GTCGATTACA GCTGCGATCA ACACCAAGAA 
CCGACGATGT ACCCCGATAT TGCCATTCAG GTTGCTCTGG CGATTAAAGC CGGGAAACAT 
GAACGCGGGA TCCTTATTTG TGGAACAGGT ATTGGGATGA GCATCTCTGC CAATAAAGTT 
TTTGGCGTCC GTGCAGCTCA GTGCCATGAT ACTTTTTCTG CCCAACGAGC CAGAAAAAGC 
AACAATGCCC AAATTATCTG TTTAGGCGCT CGCGTTATTG GCCCGGAGTT AGCCAAAACC 
CTGATCGAGG CTTGGTTAGA TGCTGAATTT GACGGAGGGG GATCAACGGA AAAAGTGGAA 
CGGATCCGCT ATTACGAACA GAGCCTGCAT GATTGA
 
Protein sequence
MLSIAIGCDD AAIEMKNQIV IFLQSKNITV VDYSCDQHQE PTMYPDIAIQ VALAIKAGKH 
ERGILICGTG IGMSISANKV FGVRAAQCHD TFSAQRARKS NNAQIICLGA RVIGPELAKT 
LIEAWLDAEF DGGGSTEKVE RIRYYEQSLH D