| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3394 |
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| Symbol | |
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| ID | 6087207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3723240 |
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| End bp | 3725690 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641598478 |
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| Product | anaerobic dimethyl sulfoxide reductase subunit A |
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| Protein accession | YP_001722114 |
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| Protein GI | 170025609 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAGA CCAACGAATC CCGGCTGTTA ACGACAGGTG TCACCCGCCG AAAACTGGTC
CAAACCACGC TTGTCGGCGG ACTGGCTATG GCAACCGGGG CGTTTTCGTT ACCGTTCTCC
CGTACCGCAC GAGCCGTTCA ATCCGCACTC AACCCCACCT CAGCCAACGA CGGTAAAGTG
ATCTGGAGCG CCTGCACCGT TAACTGCGGC AGCCGCTGCC CGCTGCGTAT GCATGTGGCT
GAGGGCGAAA TCAAATATGT CGAAACGGAT AACACCGGTG ATGATAATTT TGAGGGGCTA
CACCAGGTAC GCGCCTGTCT GCGAGGGCGG TCTATGCGCC GCCGGGTCTA TAACCCAGAC
CGCTTAAAAT ACCCGATGAA ACGAATCGGT GCCCGTGGTG AAGGGAAATT CAAACGTATC
TCGTGGGAAG AGGCATTCGA GACTATCGTT GGCAGCATGC AGAATATTAT CAAGGAATAT
GGCAATGAAG CCATTTACCT GAATTACGGT ACCGGCACGA TAGGCGGCAC CATGACCCGC
TCTTGGCCGC CGGGCGCGAC GCTCTTGGCT CGCTTGATGA ATTGCTGCGG TGGCTACCTC
AACCAGTATG GTGATTACAG TACCGCACAG ATTGCCGCGG GACTCAATTA TACCTACGGT
GGCTGGGCTG ACGGTAACAG CCCGTCCGAT ATCGAAAACA GTAAGCTGGT GGTGTTGTTC
GGTAATAACC CGGCTGAAAC CCGGATGAGT GGCGGTGGGG TCACCTATTA TCTGGAGCAG
GCACGAGAGA AATCCAATGC CAAAATGATC GTGATTGACC CCCGTTATAC CGACACTGCC
GCAGGCCGTG AAGATGAATG GATCCCACTA CGACCAGGCA CTGATGCCGC ATTGGCCTCT
GCGTTAGCTT ATGTGATGAT CACTGAAAAT CTGGTGGATC AACCCTTCCT TGACCAATAT
TGCGTTGGTT ATGACGAGAA GACGCTACCA GAAGGCGCAC CCGAAAATAG TCACTACAAA
GCCTATATTT TAGGGCAGGG CGCAGATAAA ACCGCCAAAA CCCCACAATG GGCAGCGGCT
ATCACCGGTA TTCCCGCCGC AAAAATCATT ACGCTAGGCC GTGAAATAGG GTCAGTGAAG
CCGGCTTATA TTTCCCAAGG TTGGGGGCCA CAACGCCATT CCAACGGCGA AAACACCAGC
CGAGCCATTG CCATGTTGGC AATCTTGACC GGTAATGTCG GTATTAATGG CGGTAACTCC
GGTGCTCGTG AAGGCTCCTA CAGCCTGCCG TTTGTCCGTA TGCCTACCTT TGAAAACCCA
GTCAAAACCA GTATCTCTAT GTTCTTGTGG ACCGATGCCA TTGAGCGTGG ACCTGAAATG
ACCGCCACCC GTGATGGGGT TCAGGGGAAA GATAAGCTGG ATGTCCCGAT CAAATTTATT
TGGAACTACG CCAGTAACTG TTTGGTGAAT CAACATTCTG AAATCAATCG CACCCATGAC
ATTCTGCAAG ACGATGAGAA ATGCGAAATG ATTGTGGTCA TTGATAACCA CATGACCTCG
TCGGCTGAAT ACGCTGATAT TATCCTGCCA GACTGTACCG CCTCCGAGCA GATGGACTTC
TGTCTGGATG CCTCTAGCGG CAATATGGCC TATGTCATTT TTGCTGATCA GGTGATTAAA
CCGCGTTTTG AGTGCAAAAA TATTTATGAC ATCACCAGTG GATTGGCAAG ACACATGGGG
GTCGAGCAGA AGTTTACCGA AGGGCGAACG CAAGAAGAGT GGATGCGCCA CCTCTACCAG
CAATCGCAAG CCGCAATCCC TGAACTGCCT TCTTTCGAGG ATTTCCGCGC TCAGGGCATG
TTTAAAAAAC GTGACCCGGC AGGCCATCAC GTTGCCTATC ACGATTTCCG CACCGATCCG
GTTGCTAACC CACTGAGTAC CCCATCAGGC AAAATTGAGA TCTATTCTGC GGCGCTGGCC
GAGATTGCCG CGACTTGGGA ACTGCAAAAA GATGATGTTA TCGATCCGTT GCCCGTGTAT
GCCGCCGGTT TTGAAAGCCA TGTTGATCCA CTGATCGAAC AGTATCCGTT GCAATTAACC
GGCTTCCACT ACAAGGCCAG AACTCACTCC ACCTACGGTA ACGTAGATGT GTTGAAAGCC
TCCTGTCTTC AGGAGATGTG GATTAACCCG ATGGATGCCG AACGGCGAGG GATCAGCAAT
GGCGATATGG TGCGGATCTT CAATGGCCGT GGTGAAGTAC AGATTAATGC CAAAGTCACT
CCGCGCATGA TGCCGGGGGT TGTCGCTTTG GGTGAGGGGG CGTGGTACAG CCCCGATGCG
AAGCGTATTG ATCGGGCGGG CAGTATCAAC GTATTGACCA CCCAGCGCCC CTCCCCGTTG
GCGAAAGGGA ACCCATCCCA CACCAACCTC GTTCAAGTCG CCAAGGCATA A
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| Protein sequence | MKETNESRLL TTGVTRRKLV QTTLVGGLAM ATGAFSLPFS RTARAVQSAL NPTSANDGKV
IWSACTVNCG SRCPLRMHVA EGEIKYVETD NTGDDNFEGL HQVRACLRGR SMRRRVYNPD
RLKYPMKRIG ARGEGKFKRI SWEEAFETIV GSMQNIIKEY GNEAIYLNYG TGTIGGTMTR
SWPPGATLLA RLMNCCGGYL NQYGDYSTAQ IAAGLNYTYG GWADGNSPSD IENSKLVVLF
GNNPAETRMS GGGVTYYLEQ AREKSNAKMI VIDPRYTDTA AGREDEWIPL RPGTDAALAS
ALAYVMITEN LVDQPFLDQY CVGYDEKTLP EGAPENSHYK AYILGQGADK TAKTPQWAAA
ITGIPAAKII TLGREIGSVK PAYISQGWGP QRHSNGENTS RAIAMLAILT GNVGINGGNS
GAREGSYSLP FVRMPTFENP VKTSISMFLW TDAIERGPEM TATRDGVQGK DKLDVPIKFI
WNYASNCLVN QHSEINRTHD ILQDDEKCEM IVVIDNHMTS SAEYADIILP DCTASEQMDF
CLDASSGNMA YVIFADQVIK PRFECKNIYD ITSGLARHMG VEQKFTEGRT QEEWMRHLYQ
QSQAAIPELP SFEDFRAQGM FKKRDPAGHH VAYHDFRTDP VANPLSTPSG KIEIYSAALA
EIAATWELQK DDVIDPLPVY AAGFESHVDP LIEQYPLQLT GFHYKARTHS TYGNVDVLKA
SCLQEMWINP MDAERRGISN GDMVRIFNGR GEVQINAKVT PRMMPGVVAL GEGAWYSPDA
KRIDRAGSIN VLTTQRPSPL AKGNPSHTNL VQVAKA
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