Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3387 |
Symbol | |
ID | 6091358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 3715826 |
End bp | 3716767 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641598471 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_001722107 |
Protein GI | 170025602 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.460491 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATA CCCTACTGAA ATCCTGTCTT ACCGCAGCAT TAATCTCAAT GGCAGGTGTT GCTGGTGCGG CCAGCAATGG TCTGATCGCC ATCATCACCC CCTCCCACGA TAATCCGTTC TTTAAAGCAG AGGCTGAAGG TGCCAAAGCG AAAGCGACGG AACTGGGATA CACCACACTG GTTGCTTCGC ATGATGACGA TGTGAACAAA CAGAACCAAC TCATTGAGAC CGCTATCGCC CGTAAAGCCA AAGCGATCAT TCTGGATAAC GCCGGCTCTG ACGCGACCAT CGGGCCATTG AAAAAAGCCA AAGCCGCGGG TATCCCGGCC TTCCTTATTG ACCGTGAAAT CAATGAAACC GGGATTGCCG TCTCTCAGAT TGTCTCTAAC AACTATCAGG GCGCGCAGCT GGGCGCGGAG AAGTTTGTCA CTCTGATGGG GGGCAAAGGT AAATATATTG AATTACTGGG GCGCGAGTCT GACACCAACG CTCATGTACG TTCGCAAGGT TATCACGACG TCATTGACGA ACATAGCGAC ATGAAGATGG TTGCTCAACA GACAGCAAAC TGGAGCCAGA CTGAAGCATT CAACCGTATG GAATCCATTT TGCAGGCTAA CCCTGATATT ACAGGGGTCA TTTCCGGTAA CGACACGATG GCATTAGGGG CCGAAGCCGC ATTAAAAGCG GCGGGCCGCA ATGATGTGGT GGTGGTGGGA TTTGATGGCA GTGACTATGT CCGCGACTCG ATCATTAACA ACGGCAATAT CAAAGCCACC GTATTGCAGC CGGGTTGGGC GCAAGCACAA ATGGCCGTTG TCCAGGCCGA TCAGTATCTG AAAACCGGTA AAACCGGTCT GGAAGAGAAA CAACTGATGG ACTGTGTATT GATTGACGAA AATAACGCTA AGAACCTGAA TGTCTTTGCG CTGAAAGACT AG
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Protein sequence | MKNTLLKSCL TAALISMAGV AGAASNGLIA IITPSHDNPF FKAEAEGAKA KATELGYTTL VASHDDDVNK QNQLIETAIA RKAKAIILDN AGSDATIGPL KKAKAAGIPA FLIDREINET GIAVSQIVSN NYQGAQLGAE KFVTLMGGKG KYIELLGRES DTNAHVRSQG YHDVIDEHSD MKMVAQQTAN WSQTEAFNRM ESILQANPDI TGVISGNDTM ALGAEAALKA AGRNDVVVVG FDGSDYVRDS IINNGNIKAT VLQPGWAQAQ MAVVQADQYL KTGKTGLEEK QLMDCVLIDE NNAKNLNVFA LKD
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