Gene YPK_3376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3376 
Symbol 
ID6089667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3703944 
End bp3704432 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content49% 
IMG OID641598460 
Productcompetence damage-inducible protein A 
Protein accessionYP_001722096 
Protein GI170025591 
COG category[R] General function prediction only 
COG ID[COG1546] Uncharacterized protein (competence- and mitomycin-induced) 
TIGRFAM ID[TIGR00199] competence/damage-inducible protein CinA C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAG GACAACTACG TCAACTCAGT ATTGCGGTTG GGCATAAGTT AAAAGAACAC 
GGTGCGTGGG TGACCTGTGC AGAATCTTGT ACTGGGGGGT GGGTAGCCAA AGCCCTGACG
GATATTGCTG GCAGTTCTGC TTATTTTGAC CGCGGTTTTG TCACCTACAG CAATGCGGCA
AAGCAAGATC TATTGGGCGT ATCTGAAACG ACCTTAGCGC GTTATGGTGC GGTGAGTGAG
GCCGTGGTAC GTGAAATGGC ATTGGGGGCA TTGAAACAAG CCAATGCAGA CTTTGCCGTT
TCCATTAGTG GTATTGCGGG GCCTGATGGT GGTAGCGCAG ATAAACCGGT AGGCACTGTC
TGGTTTGGTT TTATCTCACG CGAAGGGCCG ATTAGTGCAA GAAAAAAACA CTTTTCTGGT
GATCGTGACT CAGTACGGTT GCAAGCAGCT GTTTTCGCAC TACAAACACT ATTCGATGAT
TTTCTGTAA
 
Protein sequence
MSEGQLRQLS IAVGHKLKEH GAWVTCAESC TGGWVAKALT DIAGSSAYFD RGFVTYSNAA 
KQDLLGVSET TLARYGAVSE AVVREMALGA LKQANADFAV SISGIAGPDG GSADKPVGTV
WFGFISREGP ISARKKHFSG DRDSVRLQAA VFALQTLFDD FL