Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3327 |
Symbol | |
ID | 6088691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 3648184 |
End bp | 3648837 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641598404 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_001722049 |
Protein GI | 170025544 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATTTA CTGACTGGGA TATCATCCGC AACCTGCTAT TGGCGGCCCG CTGGACGCTG TTACTGTCAC TCACGGCCTT CTTCGGTGGC ACGTTGGTGA CATTACCGCT AATGCTGATG CGGTTGAGCC ACTGGCGTTG GGCGGCGCGC TTTGTCCGTT TATATACCGA GCTGTTCCAA GGAACCCCGT TATTGATGCA GCTATTTTTG GCCTTTTTCG GTCTGGCGCT GTTTGGCATC GATGTTAGCC CGTGGACAGC AGCGGCCATG GCACTCACCT TATTCACCAG TGCATTTTTG GTGGATATCT GGTGCGGCAG TATCGCCGCT TTGCCGAAAG GCCAGTGGGA AGCATCACGT TGCTTGGGGT TGAGTTTTCA CCAAACGCTC TTTCGGGTGA TTGCCCCACA AGCGATGCGT ATCGCGATTG CGCCAACCGT AGGGTTTTCG GTGCAGGTTA TCAAAGGCAC GGCGCTGGCC TCCATCATTG GTTTTGTCGA GCTAACCAAA GCGGGCACTA TGCTGAACAA TGTCACTTAT CAGCCATTTA AAGTCTTTGG GCTGGTCGCG CTGGGCTATT TCCTGATGTG TTATCCCCTG TCGCGTTATA GCCATTATCT GGAGAAGAAA TTCCATGCCA TTGATCACCA TTAA
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Protein sequence | MTFTDWDIIR NLLLAARWTL LLSLTAFFGG TLVTLPLMLM RLSHWRWAAR FVRLYTELFQ GTPLLMQLFL AFFGLALFGI DVSPWTAAAM ALTLFTSAFL VDIWCGSIAA LPKGQWEASR CLGLSFHQTL FRVIAPQAMR IAIAPTVGFS VQVIKGTALA SIIGFVELTK AGTMLNNVTY QPFKVFGLVA LGYFLMCYPL SRYSHYLEKK FHAIDHH
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