Gene YPK_3306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3306 
Symbol 
ID6088411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3619720 
End bp3620460 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content45% 
IMG OID641598383 
Producthypothetical protein 
Protein accessionYP_001722028 
Protein GI170025523 
COG category[S] Function unknown 
COG ID[COG3034] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.635289 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAAAA TCGCGCTGTT ATTTGCGATG ATAATTTGCT TGCCTGCGGC ATCCTTCACC 
AGCTCAGCCA GTGAGCCAGT GGCAGTATCC AAAGAGCTAA AACAGCAACT ACTGGGGTCA
TCGGTTTATA TTCAGATTTT CAAAGAAGAG CGTGTCTTGG AGTTGTATGC CAAGCTACAA
GGCGAGTATC GTTTAGTGCA AAGCTATCCT ATTTGTGAAT TCTCAGGAGG GCTTGGGCCG
AAACGCCGTG AAGGGGATTT CAAAAGCCCA GAAGGCTTTT ACAGCATTAA TACGCGCCAT
TTAAAACCCG ACAGTCAGTT TTATCGAGCC ATTAATATCG GTTTTCCTAA TGATTATGAT
AAGTCGCAAG GGTATTCAGG GAAATATCTG ATGATCCACG GTGCTTGTAA ATCAATTGGC
TGCTATGCAA TGACCGATGC CTATATGGAT GAGATATTTA ACTACGTGAG AACCGCGTTT
ATCTTTGGTC AGGAAAAAGT GGATATCAGT ATCTACCCCT TCCGTATGAC AAAACAAAAT
ATGCAACGCC ACCGTAATTC GTCCTATTCC AACTTCTGGC GTCAACTGCA ACCGGGATAT
ACCTATTTTG CCAAAAACCG GATGCCACCG CCCGTTTCAG TCAGCAACGG GCAGTATGTG
TTAAGCCCGC CACCGCTCAC TAGTACGCCA ACATCGCAAT TGGCACTAAT TAAAACCGAC
CCGCTCACCA AGACAGAATA A
 
Protein sequence
MGKIALLFAM IICLPAASFT SSASEPVAVS KELKQQLLGS SVYIQIFKEE RVLELYAKLQ 
GEYRLVQSYP ICEFSGGLGP KRREGDFKSP EGFYSINTRH LKPDSQFYRA INIGFPNDYD
KSQGYSGKYL MIHGACKSIG CYAMTDAYMD EIFNYVRTAF IFGQEKVDIS IYPFRMTKQN
MQRHRNSSYS NFWRQLQPGY TYFAKNRMPP PVSVSNGQYV LSPPPLTSTP TSQLALIKTD
PLTKTE