Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3246 |
Symbol | |
ID | 6088413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 3550125 |
End bp | 3551489 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641598323 |
Product | major facilitator transporter |
Protein accession | YP_001721968 |
Protein GI | 170025463 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGATA ATAAAATGAC TCCGCTAGAG CTTCGAGCTA CCTGGGGGCT AGGTACGGTA TTCTCACTAC GCATGCTGGG CATGTTCATG GTATTACCGG TTCTGACCAC CTATGGTATG GCACTTTCCG GTGCCAGTGA GGCATTGATA GGTATCGCAA TTGGTATCTA TGGTTTATCT CAGGCCATTT TTCAGATCCC CTTTGGGCTG CTTTCTGATC GTATCGGTCG TAAACCCATG ATCATCGGTG GGCTGCTGGT TTTTGCATTA GGTAGCATTA TTGCCGCATT AAGTGATTCT ATTTGGGGCA TTATTCTTGG CCGTGCACTG CAAGGCTCCG GTGCAATCGC CGCCGCTGTC ATGGCGCTAT TGTCTGATTT AACCCGTGAG CAAAACCGCA CCAAAGCAAT GGCATTTATT GGTGTCAGTT TTGGTGTCAC CTTTGCTATG GCCATGGTGC TGGGGCCAAT TGTGACGCAT GCTTTTGGTC TGCAAGCTCT GTTTTGGGGG ATTGCAATAC TGGCGCTGTT AGGCATTGTT ATCACATTAA CCGTGGTTCC TTCAGCCAAT AGCCATGTCC TCAATCGTGA ATCGAGCATG GTTAAAGGCA GCGTGAGTAA GGTGCTCCAC AACAGTCGGT TACTTAAACT CAATTTCGGC ATCATGTGCT TGCATATCCT ACTGATGTCG AGCTTTGTTG CCTTACCTCA AATGATGGCT AATGCTGGGT TAGCGCCCGC TCAACATTGG GTTGTTTATC TGGTAACCAT GTTGGTCTCT TTCGCCGCAG TAGTACCGTT TATTATTTAT GCCGAAATGA AGCGCCGCAT GAAGCAGGTC TTTATGGGCT GTGTAGCGGT ATTATTTATC GCCGAGGTCG TATTGTGGTT TGCTGGCCAA GACCTATGGA TAATTATTGC CGGTGTGCAG TTATTCTTTA TTGCTTTTAA TGTGATGGAA GCTATTTTGC CATCGCTGAT CAGTAAAGAA TCACCTGCTG GTTACAAAGG CACTGCCATG GGGATTTATT CCACCAGTCA GTTTATTGGC GTAGCGATTG GCGGCAGTCT TGGGGGCTGG ATATTTGGCC TTGAAGGTGC CGATATGGTA TTTGCGGCTG GAGCTATTAT CGCACTGGTA TGGTTCGCCG TCAGTGTCAC CATGCAAGAA CCGCCTTATG TTAGCAGCCT GCGCATCACC TTGTCAGAGT CGGCTGTAAA AAATACAACC TTGGAAGAGC GCCTCAAAGC CCAGCCAGGT GTTACCGAGG CGGTCGTGGT CACGGCGGAA CGCAGTGCTT ATGTCAAAGT CGATATTAAA CAGACTAATC GCAACCAACT GGAACAGTTG ATCAATGCGG CTTAA
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Protein sequence | MNDNKMTPLE LRATWGLGTV FSLRMLGMFM VLPVLTTYGM ALSGASEALI GIAIGIYGLS QAIFQIPFGL LSDRIGRKPM IIGGLLVFAL GSIIAALSDS IWGIILGRAL QGSGAIAAAV MALLSDLTRE QNRTKAMAFI GVSFGVTFAM AMVLGPIVTH AFGLQALFWG IAILALLGIV ITLTVVPSAN SHVLNRESSM VKGSVSKVLH NSRLLKLNFG IMCLHILLMS SFVALPQMMA NAGLAPAQHW VVYLVTMLVS FAAVVPFIIY AEMKRRMKQV FMGCVAVLFI AEVVLWFAGQ DLWIIIAGVQ LFFIAFNVME AILPSLISKE SPAGYKGTAM GIYSTSQFIG VAIGGSLGGW IFGLEGADMV FAAGAIIALV WFAVSVTMQE PPYVSSLRIT LSESAVKNTT LEERLKAQPG VTEAVVVTAE RSAYVKVDIK QTNRNQLEQL INAA
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