Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3239 |
Symbol | ampG |
ID | 6089351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 3541956 |
End bp | 3543434 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641598316 |
Product | muropeptide transporter |
Protein accession | YP_001721961 |
Protein GI | 170025456 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00901] AmpG-related permease |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.83474 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCAATC GCTATTCAAA CCTTTTTACC CAACGTAACT CTATCATTCT TCTGTTATTG GGCTTTGCCT CAGGCCTTCC TTTAGCGCTG ACCAGTGGCA CACTGCAGGC ATGGATGACC GTGGAAAATG TCAATCTTAA GACGATTGGT ATTTTCTCGC TGGTTGGCCA AGCCTATGTC TTTAAGTTTC TTTGGTCCCC GCTGATGGAC CGCTACACGC CGTCCTTTTT AGGGCGTCGG CGCGGTTGGT TACTGGTAAG CCAGCTATTA CTCATTATTG CCATTATCGC GATGGGCTTT ATGGAGCCTG CCAAACATTT ATGGTGGCTG GCAGCGGTCG CGGTATTAGT CGCATTTTGT TCAGCTTCTC AAGATATCGT TTTTGATGCT TATAAAACTG ACTTGCTTAC CACTGAAGAG CGCGGTACGG GTGCGGCAGT ATCGGTACTA GGCTACCGCC TGGCAATGCT GGTTTCCGGT GGGTTAGCGT TGTGGATTGC AGATCGCTAT CTTGGCTGGC AATCAACTTA TTGGCTAATG GCCGGATTGA TGTTGATTGG GGTATTCGCT ACCTTGCTCG CCCCTGAACC CGATATCCGA ATTGCCCCAC CAAAAACATT GGAGCAGGCC ATTGTCGCTC CATTACGTGA TTTTTTTGGT CGTAATAATG CTTGGCTGAT CTTGCTGCTT ATTGTGTTTT ACAAAATGGG AGATGCGTTT GCCGCAAGCC TGAGTACAAC TTTTCTGATA CGTGGCGTCG GGTTTGATGC CGGTGAAGTG GGGTTGGTGA ATAAAACGCT GGGGCTGATC GCCACGATTA TTGGCGCTCT CTATGGCGGC CTATTAATGC AACGGCTGAG CTTATTCCGT GCCTTAATGA TTTTCGGTAT TTTACAAGCA GTTTCTAACA TGGGCTATTG GCTACTCGCT ATCACTGATA AAAATATATT CTCCATGGGC AGTGCCATAT TTTTGGAGAA CTTATGCGGA GGGATGGGAA CAGCAGCCTT TGTCGCATTA CTCATGACAC TCTGTAACAA GTCCTTCTCC GCCACACAGT TTGCCCTCTT ATCGGCCCTC TCTGCTGTGG GCCGGGTTTA TGTTGGCCCG ATTGCCGGTT GGTTTGTAGA GGCCCATGGC TGGTCACTTT TCTATTTATT CTCTATTGCC GCCGCCATTC CAGGGCTATT GCTACTGTAT GTCTGCCGTC AAACGCTGGA TCATACGCAG AAAACCGACG AATTTATGCC CCGGATCGCA TTTAAAACAG CTTACCGTTG GGCACTACGT TTACTCATTA TTGGCGGTCT GTTGCTGTCT GTGTGGCTAA TCTTGTTGAT ATGTAACGCA CTAGATTGGA CCTCTGCACC CCAAGTGGCC GATACCTTAC TCTTGAGGGG GATTCAGTTC AGCATCGTCG GGATGACTCT CGGGGGGCTG CTGGATTATT TAGCGCTCAG ACGGCAAAAA CTAGCCTAG
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Protein sequence | MPNRYSNLFT QRNSIILLLL GFASGLPLAL TSGTLQAWMT VENVNLKTIG IFSLVGQAYV FKFLWSPLMD RYTPSFLGRR RGWLLVSQLL LIIAIIAMGF MEPAKHLWWL AAVAVLVAFC SASQDIVFDA YKTDLLTTEE RGTGAAVSVL GYRLAMLVSG GLALWIADRY LGWQSTYWLM AGLMLIGVFA TLLAPEPDIR IAPPKTLEQA IVAPLRDFFG RNNAWLILLL IVFYKMGDAF AASLSTTFLI RGVGFDAGEV GLVNKTLGLI ATIIGALYGG LLMQRLSLFR ALMIFGILQA VSNMGYWLLA ITDKNIFSMG SAIFLENLCG GMGTAAFVAL LMTLCNKSFS ATQFALLSAL SAVGRVYVGP IAGWFVEAHG WSLFYLFSIA AAIPGLLLLY VCRQTLDHTQ KTDEFMPRIA FKTAYRWALR LLIIGGLLLS VWLILLICNA LDWTSAPQVA DTLLLRGIQF SIVGMTLGGL LDYLALRRQK LA
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