| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3235 |
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| Symbol | tig |
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| ID | 6089097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3538871 |
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| End bp | 3540175 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641598312 |
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| Product | trigger factor |
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| Protein accession | YP_001721957 |
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| Protein GI | 170025452 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
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| TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00052643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGTTT CTGTTGAAAC CACTCAAGGC CTTGGCCGCC GTGTAACAAT TACTGTTGCT
GCTGACAGCA TTGAGAAAGC AGTAAAAAGT GAATTAGTTA AAGCCGCTAA AAATGTTCGT
ATCGACGGTT TCCGCAAAGG CCATGTGCCG ATGAATATCG TTGAACAGCG TTACGGCGCC
TCAGTACGTC AAGATGTACT GGGTGATCTG ATGCAACGTA ATTTCGTTGA TGCGATCATC
AAAGAAAAAA TCAATCCAGC TGGCGCGCCA AACTACGTGC CAGGTGAGTA TAAGCAGGGT
GAAGATTTTA CTTATTCTGT CGAGTTCGAA GTGTATCCAG AAGTGGAACT GAAAGATCTG
GAAAGCATTG AAGTTGAGAA GCCAGTTGTT GAAGTTAACG ACGCTGACGT TGATACCATG
CTGGAAACAC TGCGTAAGCA ACAAGCTACC TGGAAAGAAA CCGACGCTGC AGCAACGGCT
GAAGACCGCG CGACTCTGGA TTTCACCGGC TCTATCGATG GTGAAGAATT TGAAGGCGGT
AAAGCGACTG ATTTCGTGCT GGCAATGGGT CAGGGCCGTA TGATCCCTGG TTTCGAAGAA
GGTGTTATCG GCCACAAGGC CGGTGAAGAA TTCACCATCG ACGTAAACTT CCCAGAAGAT
TACCACGCAG AAAATCTGAA AGGTAAATCA GCTAAATTCG CCATCGTGCT GAAGAAAGTT
GAAGTTCGCG AACTGCCAGA ACTGACTGAA GAATTTATCA AACGTTTTGG TGTTGCTGAT
GGTTCATTGG CAGGTCTGCG TGCTGAAGTG CGTAAAAATA TGGAACGTGA GCTGAAAGGC
GCGGTGCGTA ACCGTGTTAA AACTCAGGCA ATCGACGGCT TGGTCAGCGC TAACAATATC
GACGTTCCAA CTGCACTGGT TGATGGCGAA ATTGATGTTC TGCGTCGTCA GGCTGCACAG
CGTTTTGGTG GCAACGAGAA ACAAGCTGCT GAACTGCCAC GCGAACTGTT CGAAGAACAA
GCTAAGCGCC GTGTCGTTGT TGGTCTGCTG TTGGGCGAAG TGATCAGCCA GCATGAGCTG
AAAGCAGATG AAGATCGTGT TAAGGCTCTG ATCGAAGAAA TGGCATCTGC TTACGAAGAT
CCACAAGAAG TGATTGAGTT CTACAGCAAG AATAAAGAGC TGATGAATAA TATGCGTAAT
GTTGCTCTGG AAGAGCAGGC AGTGGAAACG CTGCTGGCTA AAGCCAAAGT AACTGAAAAA
CCAACGACTT TCAGTGAGCT GATGAATCAG ACCACTGCAG CGTAA
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| Protein sequence | MQVSVETTQG LGRRVTITVA ADSIEKAVKS ELVKAAKNVR IDGFRKGHVP MNIVEQRYGA
SVRQDVLGDL MQRNFVDAII KEKINPAGAP NYVPGEYKQG EDFTYSVEFE VYPEVELKDL
ESIEVEKPVV EVNDADVDTM LETLRKQQAT WKETDAAATA EDRATLDFTG SIDGEEFEGG
KATDFVLAMG QGRMIPGFEE GVIGHKAGEE FTIDVNFPED YHAENLKGKS AKFAIVLKKV
EVRELPELTE EFIKRFGVAD GSLAGLRAEV RKNMERELKG AVRNRVKTQA IDGLVSANNI
DVPTALVDGE IDVLRRQAAQ RFGGNEKQAA ELPRELFEEQ AKRRVVVGLL LGEVISQHEL
KADEDRVKAL IEEMASAYED PQEVIEFYSK NKELMNNMRN VALEEQAVET LLAKAKVTEK
PTTFSELMNQ TTAA
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