Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3207 |
Symbol | |
ID | 6087143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 3507395 |
End bp | 3508582 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641598284 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001721929 |
Protein GI | 170025424 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.474787 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAAA ACAGAGGGGT AATGCCTCTG GCTGCAATTC TGGTACTTTC AGGCAGCTTA GTACTTATAG GATGTAATGA CAAAGATGCG GCGCAAGCCG GTGCTCAACA AGCTCCTGAG GTTGGTGTTG TGACATTGAA AGCAGAACCG CTGAATATCA CAACCGATTT GCCAGGCCGC ACGTCCGCCT TCCGTGTTGC AGAAGTTCGC CCGCAGGTAA GCGGGATTAT TCTCAAACGT AATTATATTG AAGGCAGTGA TGTCACCGCC GGAACATCCC TTTATCAAAT TGACCCTGCG ACTTATCAGG CCGCTTATGA CAGTGCAAAA GGTGATCTGG CTAAAGCACA GGCTTCAGCA CAAATTGCTC ATTTAACCGT CAATCGCTAC AAGCCATTGT TGGGTACTAA CTACATCAGT AAACAAGAAT ATGATCAGGC CCTATCAGAT GCCCAACAAG CAGATGCCAC CGTGTTAGCA GCAAAAGCGG CACTGGAGTC TGCACGCATT AATCTGGCGT ATACCCAAGT GAGATCACCA ATCAGCGGCC GTACCGGTAA ATCTGCCGTG ACGGAAGGTG CATTGGTTAC CAGTGGTCAG GCGTCAGCAA TGACTACCGT TCAACAGCTT GATCCAATGT ATGTCGATGT CACTCAATCG AGTGATGAGT TCCTACGGCT GAAAAAAGAG CTGGCTGATG GCATTCTCAA GCAAGAAAAC GGCAAAGCTA AAGTCCGTTT GTTGCTGGAA AACGGGGTTG AATATACAGA AACCGGTACT TTGGAGTTCT CCGGTGTCAC TGTTGATGAA ACTACCGGTT CGATTACTCT CCGTGCGATC TTCCCTAATC CAAATGAGGC GCTGTTGCCA GGCATGTTTG TCCGTGCCCG TTTGGATGAA GGTATCCGTC CTGATGCGCT GTTAGTTCCG CAACAAGGCG TGACTCGCAA CCCACGTGGT GAAGCAACAG CCATGGTCGT CGGCGCGGGT AATAAAGTTG AAATGCGTAC CCTGATAGCG AACCAAGCAA TCGGTAATAA ATGGCTGGTC ACTGAAGGGC TAAAAGCCGG TGATCGCCTG ATTATTTCCG GCTTGCAGAA AATCAAACCA GGTGTAGAGG TAAAAGTGCA GGAAGTTACT GACACTGCAC CAGAAACAGC CCCGGCTGAT ACAGCGAAGA AGTCTTAA
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Protein sequence | MSKNRGVMPL AAILVLSGSL VLIGCNDKDA AQAGAQQAPE VGVVTLKAEP LNITTDLPGR TSAFRVAEVR PQVSGIILKR NYIEGSDVTA GTSLYQIDPA TYQAAYDSAK GDLAKAQASA QIAHLTVNRY KPLLGTNYIS KQEYDQALSD AQQADATVLA AKAALESARI NLAYTQVRSP ISGRTGKSAV TEGALVTSGQ ASAMTTVQQL DPMYVDVTQS SDEFLRLKKE LADGILKQEN GKAKVRLLLE NGVEYTETGT LEFSGVTVDE TTGSITLRAI FPNPNEALLP GMFVRARLDE GIRPDALLVP QQGVTRNPRG EATAMVVGAG NKVEMRTLIA NQAIGNKWLV TEGLKAGDRL IISGLQKIKP GVEVKVQEVT DTAPETAPAD TAKKS
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