Gene YPK_3196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3196 
SymbolrecR 
ID6088027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3496377 
End bp3496952 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content52% 
IMG OID641598273 
Productrecombination protein RecR 
Protein accessionYP_001721918 
Protein GI170025413 
COG category[L] Replication, recombination and repair 
COG ID[COG0353] Recombinational DNA repair protein (RecF pathway) 
TIGRFAM ID[TIGR00615] recombination protein RecR 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.49485 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGCGT TGCGTTGTTT ACCGGGTGTT GGCCCGAAAT CGGCGCAACG TATGGCATTT 
CAGCTATTAC AGCGCGATCG TAGTGGTGGA ATGCGCCTGG CGCAGGCTCT GACTCGGGCA
ATGTCTGAAA TAGGCCATTG TGCAGATTGT CGTACATTTA CCGAGCAAGA GCACTGCACC
ATCTGCTTGA ATCCCCGCCG TCAACAAAAT GGTCAAATCT GTGTGGTCGA AAGCCCGGCA
GATATCCATG CCATTGAGCA AACTGGCCAG TTTGGCGGGC GTTATTTTGT GCTGATGGGG
CATTTATCAC CGATGGATGG TATTGGCCCT GGTGATATAG GGCTAGATCT ACTGGAGAAA
CGGCTTTCTA CTGAGGCTAT CAGTGAGGTC ATTTTAGCCA CGAATCCAAC CGTTGAAGGG
GATGCAACAG CCAACTATAT CGGCCAGATG TGTGGCCAAT ATGGCATACT GGCCAGCCGC
ATCGCCCATG GCGTTCCTGT TGGTGGCGAG TTAGAAATGG TTGATGGCAC CACGTTATCT
CACTCGTTAG CAGGGCGTAA TCCCATCAAG TACTGA
 
Protein sequence
MEALRCLPGV GPKSAQRMAF QLLQRDRSGG MRLAQALTRA MSEIGHCADC RTFTEQEHCT 
ICLNPRRQQN GQICVVESPA DIHAIEQTGQ FGGRYFVLMG HLSPMDGIGP GDIGLDLLEK
RLSTEAISEV ILATNPTVEG DATANYIGQM CGQYGILASR IAHGVPVGGE LEMVDGTTLS
HSLAGRNPIK Y