| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3190 |
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| Symbol | |
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| ID | 6088004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3488912 |
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| End bp | 3489985 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641598267 |
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| Product | CDP-glucose 4,6-dehydratase |
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| Protein accession | YP_001721912 |
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| Protein GI | 170025407 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR02622] CDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.170575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAATA ATAGTTTCTG GCAAGGTAAA CGGGTTTTTG TAACAGGCCA TACTGGGTTT
AAAGGTGGCT GGTTGAGTTT ATGGTTGCAA ACCATGGGGG CAACGGTAAA AGGTTACTCT
CTGACCGCCC CCACTGTGCC TAGCCTATTT GAGACCGCAC GAGTTGCCGA CGGGATGCAA
TCGGAAATCG GTGATATTCG TGATCAAAAC AAATTATTAG AATCAATCCG CGAATTCCAA
CCAGAGATTG TTTTCCACAT GGCTGCTCAG CCACTGGTCC GTCTATCCTA TTCCGAGCCT
GTTGAAACCT ACTCGACGAA TGTTATGGGT ACCGTTTATT TACTGGAAGC TATTCGCCAT
GTTGGTGGCG TCAAAGCGGT GGTCAATATC ACCAGTGATA AATGCTACGA TAATAAAGAG
TGGATCTGGG GCTATCGCGA AAATGAAGCG ATGGGGGGGT ATGATCCTTA CTCCAACAGT
AAAGGTTGTG CGGAATTAGT GACGTCATCC TACCGTAATT CGTTCTTCAA TCCAGCGAAC
TATGGCCAGC ATGGCACTGC CGTAGCGACA GTGCGTGCGG GTAATGTCAT CGGTGGTGGC
GATTGGGCAT TGGATCGCAT CGTTCCAGAT ATTCTTCGGG CGTTTGAACA GTCCCAACCA
GTGATTATTC GCAACCCACA TGCCATTCGC CCATGGCAGC ATGTGTTGGA GCCTTTGTCG
GGTTATTTGC TGTTGGCACA GAAGTTATAT ACTGACGGTG CTGAATATGC CGAAGGTTGG
AACTTTGGTC CTAACGATGC TGATGCTACT CCAGTAAAAA ACATTGTTGA ACAAATGGTG
AAATATTGGG GAGAGGGTGC AAGCTGGCAA TTAGATGGCA ATGCTCACCC TCATGAAGCT
CATTATCTGA AACTGGATTG TTCAAAAGCT AAAATGCAAC TTGGCTGGCA TCCTCGCTGG
AACTTGAATA CTACGCTCGA ATATATTGTG GGCTGGCACA AGAACTGGTT ATCAGGCACA
GATATGCATG AATACAGTAT TACTGAAATT AATAATTACA TGAACACTAA ATGA
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| Protein sequence | MINNSFWQGK RVFVTGHTGF KGGWLSLWLQ TMGATVKGYS LTAPTVPSLF ETARVADGMQ
SEIGDIRDQN KLLESIREFQ PEIVFHMAAQ PLVRLSYSEP VETYSTNVMG TVYLLEAIRH
VGGVKAVVNI TSDKCYDNKE WIWGYRENEA MGGYDPYSNS KGCAELVTSS YRNSFFNPAN
YGQHGTAVAT VRAGNVIGGG DWALDRIVPD ILRAFEQSQP VIIRNPHAIR PWQHVLEPLS
GYLLLAQKLY TDGAEYAEGW NFGPNDADAT PVKNIVEQMV KYWGEGASWQ LDGNAHPHEA
HYLKLDCSKA KMQLGWHPRW NLNTTLEYIV GWHKNWLSGT DMHEYSITEI NNYMNTK
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