Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3183 |
Symbol | |
ID | 6090812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 3480277 |
End bp | 3481398 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641598260 |
Product | GDP-mannose 4,6-dehydratase |
Protein accession | YP_001721905 |
Protein GI | 170025400 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1089] GDP-D-mannose dehydratase |
TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0784026 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAAGA TTGCGCTCAT TACTGGTATT ACAGGACAAG ATGGCTCTTA TTTGGCTGAG TTTTTATTAG AAAAGGGTTA TGAGGTTCAT GGTATTAAGC GCCGAGCTTC ATCTTTTAAT ACCAGCCGCA TTGATCATAT TTATCAAGAT CGCCATGAGA CGAATCCACG CTTCTTTTTA CATTATGGTG ACTTGACTGA CACGTCGAAT TTAATTCGTT TGGTCCAGGA AATTCAGCCT GATGAGATTT ATAATTTGGG TGCACAATCT CATGTGGCTG TTTCATTTGA ATCACCGGAA TATACTGCCG ATGTTGATGC CATGGGGACA CTGCGGTTGC TAGAGGCCAT TCGTATCAAT GGGCTTGAAA AGAAGACTCG TTTCTATCAA GCCTCAACCT CAGAGCTTTA TGGTTTAGTG CAGGAAACGC CTCAGCGTGA AACAACGCCA TTCTATCCGC GTTCTCCTTA TGCTGTTGCC AAAATGTATG CTTACTGGAT TACAGTAAAT TACCGTGAAT CATATGGAAT GTATGCTTGT AACGGAATTT TATTTAACCA TGAGTCTCCT CGTCGTGGTG AAACATTTGT TACTCGGAAG ATTACCCGTG CTGTTGCGAA TATTGCATTA GGTCTAGAAA AATGTCTCTA TTTAGGCAAT ATAGATTCGC TACGTGACTG GGGCCATGCG AAAGATTATG TGCGTATGCA ATGGATGATG TTGCAACAAG ATAAGCCAGA AGATTTTGTT ATTGCAACAG GCAAGCAAAT TACCGTTCGT GAGTTTGTAC GTATGTCAGC AAGAGAAGCA GGGATTGAAT TGGAATTTAG TGGAGAAGGC GTTGAAGAGG TTGCCACTGT TGTTGCTATT AATGGTAACC ATATTTCTTC TGTCAATATT GGAGATGTAA TAGTCCGTGT TGATCCACGT TATTTCCGTC CTGCTGAAGT TGAAACATTA TTAGGCGATC CAACTAAGGC TAAAAAAGTA TTAGGCTGGG TACCTGAAAT TACGGTTGAA GAAATGTGTG CTGAAATGGT CGCTAGTGAC TTAGAGCAGG CTAAACAGCA TGCATTGTTA AAGGCTAATG GCTTTGACGT ATCCATTTCG TTGGAGAATT AA
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Protein sequence | MTKIALITGI TGQDGSYLAE FLLEKGYEVH GIKRRASSFN TSRIDHIYQD RHETNPRFFL HYGDLTDTSN LIRLVQEIQP DEIYNLGAQS HVAVSFESPE YTADVDAMGT LRLLEAIRIN GLEKKTRFYQ ASTSELYGLV QETPQRETTP FYPRSPYAVA KMYAYWITVN YRESYGMYAC NGILFNHESP RRGETFVTRK ITRAVANIAL GLEKCLYLGN IDSLRDWGHA KDYVRMQWMM LQQDKPEDFV IATGKQITVR EFVRMSAREA GIELEFSGEG VEEVATVVAI NGNHISSVNI GDVIVRVDPR YFRPAEVETL LGDPTKAKKV LGWVPEITVE EMCAEMVASD LEQAKQHALL KANGFDVSIS LEN
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